Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.56□□□□□ -2
RTTNQ86VV8 AC009977.1-201ENST00000586015 570 ntBASIC2.56□□□□□ -2
RTTNQ86VV8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.56□□□□□ -2
RTTNQ86VV8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.56□□□□□ -2
RTTNQ86VV8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 AP003122.5-201ENST00000527668 3766 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 MIR26A1-201ENST00000362205 77 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.55□□□□□ -2
RTTNQ86VV8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 AL445528.1-201ENST00000426330 420 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 CBX1P4-201ENST00000439415 457 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.55□□□□□ -2
RTTNQ86VV8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 RN7SL75P-201ENST00000461926 281 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RTTNQ86VV8 RNU6-1231P-201ENST00000517185 103 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.55□□□□□ -2
RTTNQ86VV8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC2.55□□□□□ -2
RTTNQ86VV8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.55□□□□□ -2
RTTNQ86VV8 FAM60CP-201ENST00000591086 664 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 AC034236.3-201ENST00000605999 461 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RTTNQ86VV8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RTTNQ86VV8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 AC093311.1-201ENST00000506586 2021 ntBASIC2.55□□□□□ -2
RTTNQ86VV8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTTNQ86VV8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTTNQ86VV8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.54□□□□□ -2
RTTNQ86VV8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.54□□□□□ -2
RTTNQ86VV8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.54□□□□□ -2
RTTNQ86VV8 AC233981.1-201ENST00000423224 461 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.54□□□□□ -2
RTTNQ86VV8 Z99127.2-201ENST00000441426 334 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 AC022431.1-201ENST00000450941 438 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.54□□□□□ -2
RTTNQ86VV8 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.54□□□□□ -2
RTTNQ86VV8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.54□□□□□ -2
RTTNQ86VV8 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTTNQ86VV8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTTNQ86VV8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTTNQ86VV8 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.54□□□□□ -2
RTTNQ86VV8 AC069277.2-201ENST00000454211 432 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.54□□□□□ -2
RTTNQ86VV8 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
RTTNQ86VV8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.54□□□□□ -2
RTTNQ86VV8 AC099506.2-201ENST00000623074 221 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 AC009950.2-201ENST00000636548 183 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 AC092079.1-201ENST00000558620 1985 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTTNQ86VV8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTTNQ86VV8 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
RTTNQ86VV8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.54□□□□□ -2
RTTNQ86VV8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
RTTNQ86VV8 BX005019.1-201ENST00000561881 1810 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 MIR1183-201ENST00000408856 89 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AL009174.1-201ENST00000426577 416 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 CASP3P1-201ENST00000446037 609 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 snoU13.18-201ENST00000459483 104 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AC107015.1-201ENST00000466902 747 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 PRDX3P4-201ENST00000470828 747 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AC078817.1-201ENST00000492623 435 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.53□□□□□ -2
RTTNQ86VV8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.53□□□□□ -2
RTTNQ86VV8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTTNQ86VV8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.53□□□□□ -2
RTTNQ86VV8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.53□□□□□ -2
RTTNQ86VV8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.53□□□□□ -2
RTTNQ86VV8 MIR4648-201ENST00000580107 72 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 FAM106CP-201ENST00000582212 507 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.53□□□□□ -2
RTTNQ86VV8 AC103710.3-201ENST00000608157 948 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AL133370.2-201ENST00000619934 439 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AC110792.3-201ENST00000595906 1614 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 USP8P1-201ENST00000494673 3183 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RTTNQ86VV8 AC134882.1-201ENST00000603738 1676 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 OR10AB1P-202ENST00000641219 1686 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTTNQ86VV8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
RTTNQ86VV8 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 CYCSP45-201ENST00000402289 315 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTTNQ86VV8 RPL7P8-201ENST00000411964 730 ntBASIC2.53□□□□□ -2
RTTNQ86VV8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.53□□□□□ -2
RTTNQ86VV8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms