Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPS26P8-201ENST00000393490 348 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MTND4LP20-201ENST00000402379 270 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP129-201ENST00000410276 118 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP104-201ENST00000410989 118 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 ELOCP8-201ENST00000439309 332 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 ELOCP15-201ENST00000442090 332 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 USP9YP25-201ENST00000457708 443 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 RPS27AP13-201ENST00000498403 237 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MRPL49P2-201ENST00000521066 465 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 SYF2P1-201ENST00000550658 413 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AL389895.1-201ENST00000554127 252 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC136624.4-201ENST00000573044 370 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AL590392.1-201ENST00000604960 446 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AL451074.6-201ENST00000608512 729 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 AP000770.2-201ENST00000623694 100 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MTND2P41-201ENST00000637599 773 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUP54Q7Z3B4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RNA5SP258-201ENST00000362750 119 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RHOT1P2-201ENST00000366423 333 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RNU6-629P-201ENST00000384061 103 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 SNORA70C-201ENST00000384538 135 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RNU2-28P-201ENST00000410457 189 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC007390.1-201ENST00000415722 356 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC108032.1-201ENST00000416706 207 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RPS24P7-201ENST00000416921 246 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 COX7BP2-201ENST00000437976 242 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RPS3AP6-201ENST00000484430 795 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RN7SKP287-201ENST00000516546 266 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 RN7SKP289-201ENST00000517244 295 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC090502.2-201ENST00000549267 280 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AL121603.1-201ENST00000553815 142 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 NBEAP1-201ENST00000554452 979 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC025884.1-201ENST00000556034 378 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AL158211.1-201ENST00000566763 763 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 MTATP6P24-201ENST00000576835 677 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC061975.8-201ENST00000587058 721 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC025588.2-201ENST00000604851 466 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC093424.1-201ENST00000604999 338 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC107952.2-201ENST00000606048 486 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AL159169.3-201ENST00000608871 561 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC097478.2-201ENST00000610572 514 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 AC011330.2-201ENST00000621680 635 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 MIR6810-201ENST00000622701 70 ntBASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP54Q7Z3B4 CDR1-202ENST00000625883 1485 ntBASIC3.84□□□□□ -1.8
NUP54Q7Z3B4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.8
NUP54Q7Z3B4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NUP54Q7Z3B4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.84□□□□□ -1.8
NUP54Q7Z3B4 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
NUP54Q7Z3B4 AL136164.4-201ENST00000625013 2135 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms