Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 COX6CP18-201ENST00000448769 222 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 RPL23AP62-201ENST00000463396 453 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 HMGB3P15-201ENST00000507326 574 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 SNORA48.10-201ENST00000516965 160 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 MTCO3P15-201ENST00000526563 574 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 NDUFS5P6-201ENST00000529136 295 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC008127.2-201ENST00000549925 1075 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AL121603.1-201ENST00000553815 142 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 HSPE1P5-201ENST00000561489 272 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 MIR5685-201ENST00000579080 79 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC103710.3-201ENST00000608157 948 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC092954.1-201ENST00000609121 445 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 RNU6-1192P-201ENST00000612197 107 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC005344.1-201ENST00000613391 459 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 RNU6-489P-201ENST00000618289 107 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 AP004289.2-201ENST00000444413 1457 ntBASIC3.38□□□□□ -1.87
NIPAL3Q6P499 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NIPAL3Q6P499 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 ANKRD36P1-201ENST00000344424 659 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 U1.1-201ENST00000384101 164 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 SNORA51.6-201ENST00000384151 125 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 RPL32P23-201ENST00000397237 405 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC096533.1-201ENST00000411645 353 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 RPS7P9-201ENST00000414704 586 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 RPS7P15-201ENST00000415804 584 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 NDUFB1P1-201ENST00000435191 180 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 MTCO3P35-201ENST00000485582 781 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL024509.2-201ENST00000493462 493 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 NPM1P41-201ENST00000512920 831 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 OR8I1P-201ENST00000529291 931 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 OR5AP1P-201ENST00000529730 940 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 XIAPP1-201ENST00000603162 600 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 SNORA62.6-201ENST00000606322 83 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL592148.2-201ENST00000612210 372 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC008083.4-201ENST00000615076 444 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL138955.1-201ENST00000622881 1040 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AC080188.3-201ENST00000624842 748 ntBASIC3.37□□□□□ -1.87
NIPAL3Q6P499 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NIPAL3Q6P499 AL365440.1-201ENST00000436135 2167 ntBASIC3.36□□□□□ -1.87
NIPAL3Q6P499 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AC000367.1-201ENST00000452711 1766 ntBASIC3.36□□□□□ -1.87
NIPAL3Q6P499 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 RNU6-1300P-201ENST00000391046 108 ntBASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 RN7SKP156-201ENST00000410308 342 ntBASIC3.36□□□□□ -1.87
NIPAL3Q6P499 RNU2-28P-201ENST00000410457 189 ntBASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.36□□□□□ -1.87
NIPAL3Q6P499 DPRXP1-201ENST00000426312 460 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms