Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC046144.1-201ENST00000478559 1853 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF43Q68DV7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 Y_RNA.112-201ENST00000363250 102 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 SNORA56-201ENST00000383966 129 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 MIR765-201ENST00000390226 114 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RN7SKP106-201ENST00000410832 272 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RN7SKP247-201ENST00000411094 308 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC127526.1-201ENST00000417526 366 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 UQCRBP1-201ENST00000421129 336 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 CYCSP12-201ENST00000437729 300 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 RPS27AP15-201ENST00000447672 466 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 HMGB3P22-202ENST00000451823 572 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RPL7P22-201ENST00000466005 733 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 ATP5LP5-201ENST00000483050 299 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 ENPP7P11-201ENST00000505915 627 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RNU6-201P-201ENST00000517100 61 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RNU6-1220P-201ENST00000517126 108 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 RN7SKP295-201ENST00000517264 153 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 NARSP2-201ENST00000518524 679 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AP000889.2-201ENST00000532684 490 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AL389895.1-201ENST00000554127 252 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC073539.2-201ENST00000597113 165 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC245389.1-201ENST00000605141 529 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 BX664608.1-201ENST00000610519 487 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AL390240.1-201ENST00000612950 384 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC018926.3-201ENST00000618841 406 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF43Q68DV7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 ASNSP1-204ENST00000641977 1664 ntBASIC5.71□□□□□ -1.5
RNF43Q68DV7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RNF43Q68DV7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF43Q68DV7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF43Q68DV7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 ABCC13-202ENST00000463099 3842 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC092681.1-201ENST00000297369 291 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF43Q68DV7 Y_RNA.158-201ENST00000363651 101 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 Y_RNA.301-201ENST00000364990 103 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 Y_RNA.339-201ENST00000365325 102 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU6-169P-201ENST00000365336 107 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU4-2-201ENST00000365668 141 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AL359634.1-202ENST00000404721 284 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 MIR548I3-201ENST00000408378 149 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 MIR548I1-201ENST00000408810 149 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RGS17P1-201ENST00000423358 553 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 PRUNEP1-201ENST00000425846 705 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AL160004.2-201ENST00000432935 350 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 MRPS31P2-201ENST00000451581 518 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 MTND3P16-201ENST00000452205 344 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 MTCO3P10-201ENST00000455912 772 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AL163973.1-201ENST00000484753 577 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RPS21P4-201ENST00000487122 248 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 RPS4XP18-201ENST00000495480 763 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC025674.1-201ENST00000507074 324 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU6-388P-201ENST00000517012 105 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 RNU6-389P-201ENST00000517048 105 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC104986.1-201ENST00000517978 436 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 OR4R1P-201ENST00000529879 463 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AP002404.1-201ENST00000532005 451 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 OR5B10P-201ENST00000532869 642 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF43Q68DV7 MIR4646-201ENST00000580775 63 ntBASIC5.7□□□□□ -1.5
RNF43Q68DV7 AC090312.2-201ENST00000582687 378 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms