Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL7L1P10-201ENST00000427790 463 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AL360081.1-201ENST00000428299 555 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 TMEM183AP1-205ENST00000432739 290 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AL138799.3-201ENST00000438968 350 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 MTCO3P45-201ENST00000443036 613 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC009220.1-201ENST00000451614 275 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 Z92846.1-201ENST00000456203 268 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 RPL5P22-201ENST00000480199 884 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AL049874.2-201ENST00000492636 288 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 TRBVA-201ENST00000498804 316 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 SNORD27.1-201ENST00000516319 72 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 RN7SKP219-201ENST00000516825 296 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC022360.1-201ENST00000521058 340 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 COX6CP8-201ENST00000522620 226 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC137627.1-201ENST00000545761 289 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AP005403.1-201ENST00000579720 229 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 uc_338.18-201ENST00000615451 175 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.9□□□□□ -1.31
RC3H1Q5TC82 NAMPTP1-201ENST00000440465 2514 ntBASIC6.9□□□□□ -1.31
RC3H1Q5TC82 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RC3H1Q5TC82 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.31
RC3H1Q5TC82 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.9□□□□□ -1.31
RC3H1Q5TC82 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RC3H1Q5TC82 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RNA5SP326-201ENST00000363209 110 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.288-201ENST00000364854 92 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RNA5SP87-201ENST00000384155 118 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 MIR141-201ENST00000384975 95 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AL606923.1-201ENST00000406616 190 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 VDAC1P9-201ENST00000412766 841 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC004980.3-201ENST00000447046 365 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RPS20P32-201ENST00000456044 356 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC079168.1-201ENST00000458741 345 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RPL23AP11-201ENST00000475260 469 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RN7SL591P-201ENST00000496150 292 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.680-201ENST00000516441 93 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RNA5SP337-201ENST00000517007 109 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RNU6-1213P-201ENST00000517075 94 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AP000857.1-201ENST00000532151 543 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AP004607.2-201ENST00000533949 322 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 OR8R1P-201ENST00000543943 764 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 MIR4330-201ENST00000579077 105 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC110743.1-201ENST00000584870 478 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 THAP12P4-201ENST00000528321 2266 ntBASIC6.89□□□□□ -1.31
RC3H1Q5TC82 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RC3H1Q5TC82 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC011504.1-201ENST00000623331 4103 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RNU6-266P-201ENST00000364225 107 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RNVU1-6-201ENST00000364688 164 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 SNORA70H-201ENST00000383910 135 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.389-201ENST00000383924 113 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 SNORA70J-201ENST00000384182 135 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RNU6-601P-201ENST00000384540 107 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RNA5SP345-201ENST00000410646 108 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RNU6-272P-201ENST00000411028 104 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 TPMTP2-201ENST00000414372 726 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RPS15AP12-201ENST00000419498 388 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL590399.4-201ENST00000436561 601 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms