Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LONRF3Q496Y0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC011477.1-204ENST00000623416 1325 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC067945.1-201ENST00000342609 618 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 SNORA31-201ENST00000362607 130 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RNA5SP307-201ENST00000362863 116 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RNU6-253P-201ENST00000384730 105 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AL590103.1-201ENST00000434488 307 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RPS25P9-201ENST00000435591 252 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC092427.1-201ENST00000439177 601 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 DDX39BP2-208ENST00000453923 258 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC092451.1-201ENST00000480211 153 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC104164.2-201ENST00000496953 495 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 STMN1P2-201ENST00000508435 439 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC008694.2-201ENST00000517591 306 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 NDUFA5P2-201ENST00000519723 344 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AP003385.6-201ENST00000531603 374 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RFPL1S-203ENST00000539579 330 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC007954.1-201ENST00000554198 494 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC012435.1-202ENST00000568772 240 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RPL23AP97-201ENST00000568955 471 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC011260.1-201ENST00000578420 472 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC023575.1-201ENST00000580510 358 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC119751.7-201ENST00000600494 245 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 WISP1-OT1-201ENST00000602893 642 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC112220.3-201ENST00000605502 502 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC008121.2-201ENST00000614647 523 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AL158063.1-201ENST00000615349 536 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC073968.1-201ENST00000618594 637 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 MIR7154-201ENST00000620673 73 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC007546.2-201ENST00000623996 360 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 SCN1A-220ENST00000641603 12506 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 MTND4P5-201ENST00000435821 1374 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 MTND4P34-201ENST00000572715 1371 ntBASIC5.02□□□□□ -1.61
LONRF3Q496Y0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LONRF3Q496Y0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 ZNF833P-201ENST00000424938 1494 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC105074.1-201ENST00000623380 3095 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 Y_RNA.194-201ENST00000363985 102 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AL121834.1-202ENST00000404494 277 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 SNRPFP1-201ENST00000414761 252 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 NPM1P11-201ENST00000417106 855 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 OFD1P18Y-201ENST00000420889 959 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC244098.2-201ENST00000422068 99 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 RSL24D1P6-201ENST00000426934 401 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 DLGAP5P1-201ENST00000430307 464 ntBASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.01□□□□□ -1.61
LONRF3Q496Y0 AC127537.2-201ENST00000439258 465 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms