Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL049693.1-201ENST00000402760 611 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL356967.1-201ENST00000406305 431 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 RN7SKP106-201ENST00000410832 272 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 UBE2V1P13-201ENST00000436983 439 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 Z82190.1-201ENST00000454534 490 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 LARP1BP2-201ENST00000486594 519 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC026979.1-201ENST00000492525 396 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 CDC42P4-201ENST00000510507 563 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 OR4P1P-201ENST00000530808 1136 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL451044.1-201ENST00000604867 238 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AL365503.1-201ENST00000605247 905 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AL590240.1-201ENST00000334118 313 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC068538.1-201ENST00000376856 336 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 SNORA40.3-201ENST00000390964 122 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 Y_RNA.608-201ENST00000410647 95 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RPS12P23-201ENST00000419579 400 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RPS24P1-201ENST00000438550 371 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 H2AFZP5-201ENST00000446960 382 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC098824.1-201ENST00000453565 980 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RPS20P32-201ENST00000456044 356 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RPS23P7-201ENST00000466210 444 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AK3P4-201ENST00000504283 583 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC078795.2-201ENST00000602835 1252 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC055876.5-201ENST00000605667 259 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC109347.2-201ENST00000610220 349 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC138749.5-201ENST00000611461 208 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC116165.2-201ENST00000616705 206 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AL359740.1-201ENST00000624340 592 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 AC084035.1-201ENST00000634543 607 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 DHX40P1-201ENST00000588725 1412 ntBASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC144BQ3MJ40 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC009643.2-201ENST00000603543 1448 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 Y_RNA.359-201ENST00000365498 102 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 SNORD96B-201ENST00000386148 79 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC114755.2-201ENST00000413520 361 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 TBCAP2-201ENST00000416175 326 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 FABP7P1-201ENST00000424004 391 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 EIF4HP2-201ENST00000424380 563 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AL353691.1-201ENST00000451332 387 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms