Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RWDD4P2-201ENST00000426392 563 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 RWDD4P1-201ENST00000488019 565 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCH1Q13635 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCH1Q13635 ZNF92P3-201ENST00000596594 954 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 SUMO2P14-201ENST00000604488 293 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCH1Q13635 AL592295.2-201ENST00000612578 206 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCH1Q13635 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCH1Q13635 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.24□□□□□ -1.73
PTCH1Q13635 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCH1Q13635 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCH1Q13635 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCH1Q13635 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PTCH1Q13635 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCH1Q13635 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCH1Q13635 TRBV12-1-201ENST00000479785 344 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.23□□□□□ -1.73
PTCH1Q13635 AC111193.1-201ENST00000504097 155 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCH1Q13635 COX6CP8-201ENST00000522620 226 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCH1Q13635 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 AC012414.2-201ENST00000559474 187 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCH1Q13635 AC024153.1-201ENST00000603103 365 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 ABI1P1-201ENST00000603375 1120 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCH1Q13635 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCH1Q13635 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.23□□□□□ -1.73
PTCH1Q13635 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 AC007496.3-201ENST00000624987 3443 ntBASIC4.23□□□□□ -1.73
PTCH1Q13635 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCH1Q13635 U3.12-201ENST00000364498 214 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCH1Q13635 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCH1Q13635 RSL24D1P4-201ENST00000400938 484 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AC019097.1-201ENST00000424783 735 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 RPL21P112-201ENST00000434403 463 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 RPS12P18-201ENST00000442381 270 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AC010095.1-201ENST00000443543 144 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCH1Q13635 EEF1B2P7-201ENST00000451177 676 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AC114781.4-201ENST00000513707 639 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 RN7SKP272-201ENST00000516988 232 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AP002812.4-201ENST00000532139 286 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AL109741.3-201ENST00000561748 592 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 MTATP6P25-201ENST00000574491 261 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.22□□□□□ -1.73
PTCH1Q13635 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTCH1Q13635 AC115085.1-201ENST00000588924 229 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCH1Q13635 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCH1Q13635 AC009452.1-201ENST00000640823 606 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTCH1Q13635 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCH1Q13635 MTND4P31-201ENST00000425607 1343 ntBASIC4.22□□□□□ -1.73
PTCH1Q13635 XGY1-201ENST00000381172 446 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 SNORA70B-201ENST00000384210 135 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 Z86062.1-201ENST00000406773 777 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 RNA5SP293-201ENST00000410527 113 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.21□□□□□ -1.73
PTCH1Q13635 RPL37P4-201ENST00000448908 268 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PTCH1Q13635 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PTCH1Q13635 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.21□□□□□ -1.73
PTCH1Q13635 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.21□□□□□ -1.73
PTCH1Q13635 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.21□□□□□ -1.73
PTCH1Q13635 AC007619.2-201ENST00000605743 379 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 OR6R2P-201ENST00000609216 300 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 MIR7843-201ENST00000622274 79 ntBASIC4.21□□□□□ -1.73
PTCH1Q13635 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PTCH1Q13635 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCH1Q13635 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCH1Q13635 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCH1Q13635 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PTCH1Q13635 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCH1Q13635 AC083799.1-201ENST00000366451 910 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PTCH1Q13635 AL353692.2-201ENST00000407054 335 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AC063976.3-201ENST00000426849 329 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AC112653.1-201ENST00000443851 386 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCH1Q13635 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCH1Q13635 AC128713.1-201ENST00000471495 306 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 OR9N1P-202ENST00000494289 481 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 MTCO1P31-201ENST00000506355 492 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms