Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPS27AP9-201ENST00000477681 438 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AL133372.1-201ENST00000493565 745 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC021678.1-201ENST00000505195 936 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC111000.2-201ENST00000507775 550 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 GMPSP1-201ENST00000514075 579 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RNA5SP76-201ENST00000516277 87 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC109635.4-202ENST00000531666 412 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC096947.1-201ENST00000603233 470 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC073657.2-201ENST00000605661 303 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 RPL23AP88-201ENST00000605759 454 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AC006249.1-201ENST00000621223 471 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AL161637.1-201ENST00000622380 412 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 AP003122.6-201ENST00000623831 495 ntBASIC2.4□□□□□ -2.03
HIST1H1AQ02539 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
HIST1H1AQ02539 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 RNU6-1181P-201ENST00000384191 106 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 TAF9BP1-201ENST00000396646 746 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 MIR1289-1-201ENST00000408836 144 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 HMGN1P24-201ENST00000412282 298 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 RAP1BP1-201ENST00000412709 553 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 NUP35P2-201ENST00000416748 943 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AL356806.1-201ENST00000422524 916 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC005019.1-201ENST00000436455 431 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 BX276092.4-201ENST00000452056 248 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC008571.1-201ENST00000467232 300 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 PRDX3P4-201ENST00000470828 747 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 MTND3P6-201ENST00000485242 339 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 RNU6-826P-201ENST00000516827 104 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC007458.1-201ENST00000542812 373 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC125611.2-201ENST00000551907 647 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC091057.2-201ENST00000602594 792 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 uc_338.25-201ENST00000613756 156 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 AC090897.3-201ENST00000636973 1157 ntBASIC2.39□□□□□ -2.03
HIST1H1AQ02539 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HIST1H1AQ02539 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 MTCO1P12-201ENST00000414273 1543 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 Z82195.2-201ENST00000612348 18351 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 OR1S2-201ENST00000302592 978 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 SNORA14A-201ENST00000364773 135 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RNU1-109P-201ENST00000383960 147 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 MIR490-201ENST00000384865 128 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 MTND4P13-201ENST00000402078 1023 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC063979.1-201ENST00000415539 377 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RPS15AP40-201ENST00000419621 391 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC069157.1-201ENST00000421749 137 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PDSS1P2-201ENST00000449397 678 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RPL5P13-201ENST00000462840 709 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PLGLA-201ENST00000465668 449 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RPL23AP11-201ENST00000475260 469 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RPL21P131-201ENST00000497298 483 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RN7SKP43-201ENST00000516173 320 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 RN7SKP157-201ENST00000516174 282 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC074029.1-201ENST00000552531 1044 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 NCAPGP2-201ENST00000557911 754 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC023043.3-201ENST00000593113 385 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AL359715.4-201ENST00000606629 1436 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms