Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLDN6P56747 AC104446.1-201ENST00000613728 1321 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AL356274.2-201ENST00000624379 3752 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLDN6P56747 AL512646.1-201ENST00000269395 1077 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 RNU6-600P-201ENST00000362524 99 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 SNORD51.1-201ENST00000365405 77 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN6P56747 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 Z99755.1-201ENST00000414048 380 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 AC005517.2-201ENST00000424673 553 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN6P56747 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN6P56747 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 RPL21P112-201ENST00000434403 463 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 YWHAZP8-201ENST00000436935 731 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 RSL24D1P2-201ENST00000445584 366 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN6P56747 CFTRP1-201ENST00000456646 183 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 RPL23AP73-201ENST00000492507 471 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 AC118465.1-201ENST00000513820 1271 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.2□□□□□ -1.9
CLDN6P56747 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN6P56747 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CLDN6P56747 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.2□□□□□ -1.9
CLDN6P56747 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.2□□□□□ -1.9
CLDN6P56747 MIR4672-201ENST00000583126 81 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.2□□□□□ -1.9
CLDN6P56747 AC006023.1-201ENST00000603944 259 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC116312.1-201ENST00000606841 314 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 AC105227.2-201ENST00000615075 605 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLDN6P56747 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN6P56747 TNPO1P3-201ENST00000436471 2662 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 USP8P1-201ENST00000494673 3183 ntBASIC3.2□□□□□ -1.9
CLDN6P56747 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLDN6P56747 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN6P56747 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLDN6P56747 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLDN6P56747 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN6P56747 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN6P56747 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN6P56747 RNA5SP126-201ENST00000365092 109 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 EI24P1-201ENST00000416584 867 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC244098.2-201ENST00000422068 99 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 RPL35AP12-201ENST00000425362 338 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC233982.1-201ENST00000451247 436 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 RPL23AP23-201ENST00000452590 471 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 MTND3P4-201ENST00000453537 303 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC004801.2-202ENST00000463559 283 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 CABYRP1-201ENST00000465493 1045 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC023598.1-201ENST00000472521 361 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC078785.3-201ENST00000476607 425 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 RPS3AP50-201ENST00000487064 803 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC008565.1-201ENST00000509046 885 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 APOOP4-201ENST00000513530 597 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC027309.2-201ENST00000520566 192 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN6P56747 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN6P56747 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDN6P56747 SNRPGP15-201ENST00000600149 222 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 AL592295.2-201ENST00000612578 206 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC018926.3-201ENST00000618841 406 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC083865.1-201ENST00000636634 831 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN6P56747 MTND4P8-201ENST00000514997 1362 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 AC000367.1-201ENST00000452711 1766 ntBASIC3.19□□□□□ -1.9
CLDN6P56747 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN6P56747 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN6P56747 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 OR5H2-201ENST00000355273 945 ntBASIC3.18□□□□□ -1.9
CLDN6P56747 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDN6P56747 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN6P56747 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms