Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC018754.1-201ENST00000607486 925 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC096586.1-201ENST00000610267 561 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC018926.1-201ENST00000616335 435 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.87□□□□□ -1.79
VCPP55072 AC006386.2-201ENST00000624491 75 ntBASIC3.87□□□□□ -1.79
VCPP55072 AC012005.1-201ENST00000624575 75 ntBASIC3.87□□□□□ -1.79
VCPP55072 U6.98-201ENST00000637157 84 ntBASIC3.87□□□□□ -1.79
VCPP55072 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCPP55072 XPOTP1-201ENST00000443317 2398 ntBASIC3.87□□□□□ -1.79
VCPP55072 AL157700.1-201ENST00000561973 1432 ntBASIC3.87□□□□□ -1.79
VCPP55072 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
VCPP55072 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCPP55072 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCPP55072 RNU6-283P-201ENST00000364788 107 ntBASIC3.86□□□□□ -1.79
VCPP55072 RNU6-354P-201ENST00000383862 107 ntBASIC3.86□□□□□ -1.79
VCPP55072 RNU6-610P-201ENST00000384264 107 ntBASIC3.86□□□□□ -1.79
VCPP55072 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VCPP55072 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
VCPP55072 TAF9BP1-201ENST00000396646 746 ntBASIC3.86□□□□□ -1.79
VCPP55072 BTBD10P2-201ENST00000404779 676 ntBASIC3.86□□□□□ -1.79
VCPP55072 AC092745.2-202ENST00000411880 369 ntBASIC3.86□□□□□ -1.79
VCPP55072 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 NDUFB1P1-201ENST00000435191 180 ntBASIC3.86□□□□□ -1.79
VCPP55072 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.86□□□□□ -1.79
VCPP55072 TMEM248P1-201ENST00000510579 951 ntBASIC3.86□□□□□ -1.79
VCPP55072 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.86□□□□□ -1.79
VCPP55072 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.86□□□□□ -1.79
VCPP55072 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 ATP5F1P7-201ENST00000567330 760 ntBASIC3.86□□□□□ -1.79
VCPP55072 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.86□□□□□ -1.79
VCPP55072 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 RNU1-30P-201ENST00000606575 163 ntBASIC3.86□□□□□ -1.79
VCPP55072 AC048347.1-201ENST00000624621 427 ntBASIC3.86□□□□□ -1.79
VCPP55072 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.86□□□□□ -1.79
VCPP55072 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.86□□□□□ -1.79
VCPP55072 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
VCPP55072 AL136520.1-201ENST00000600311 1322 ntBASIC3.86□□□□□ -1.79
VCPP55072 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.86□□□□□ -1.79
VCPP55072 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VCPP55072 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VCPP55072 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCPP55072 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCPP55072 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCPP55072 RNA5SP189-201ENST00000364920 115 ntBASIC3.85□□□□□ -1.79
VCPP55072 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VCPP55072 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.85□□□□□ -1.79
VCPP55072 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.85□□□□□ -1.79
VCPP55072 AC007390.1-201ENST00000415722 356 ntBASIC3.85□□□□□ -1.79
VCPP55072 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
VCPP55072 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AL590399.6-201ENST00000446396 307 ntBASIC3.85□□□□□ -1.79
VCPP55072 AL096803.2-201ENST00000450032 677 ntBASIC3.85□□□□□ -1.79
VCPP55072 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VCPP55072 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AC126121.1-201ENST00000482313 553 ntBASIC3.85□□□□□ -1.79
VCPP55072 NCOR1P1-202ENST00000486162 291 ntBASIC3.85□□□□□ -1.79
VCPP55072 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.85□□□□□ -1.79
VCPP55072 RNU5A-7P-201ENST00000515979 116 ntBASIC3.85□□□□□ -1.79
VCPP55072 RNU6-1231P-201ENST00000517185 103 ntBASIC3.85□□□□□ -1.79
VCPP55072 AP003355.1-201ENST00000518956 587 ntBASIC3.85□□□□□ -1.79
VCPP55072 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AC008011.1-201ENST00000545989 227 ntBASIC3.85□□□□□ -1.79
VCPP55072 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.85□□□□□ -1.79
VCPP55072 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.85□□□□□ -1.79
VCPP55072 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.85□□□□□ -1.79
VCPP55072 LARP7P3-201ENST00000579888 337 ntBASIC3.85□□□□□ -1.79
VCPP55072 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AC078880.5-201ENST00000617845 421 ntBASIC3.85□□□□□ -1.79
VCPP55072 AC093875.1-201ENST00000623688 504 ntBASIC3.85□□□□□ -1.79
VCPP55072 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCPP55072 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
VCPP55072 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
VCPP55072 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.84□□□□□ -1.79
VCPP55072 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 RPL22P22-201ENST00000395439 379 ntBASIC3.84□□□□□ -1.79
VCPP55072 PRRC2CP1-201ENST00000404428 159 ntBASIC3.84□□□□□ -1.79
VCPP55072 AL031121.1-201ENST00000406553 254 ntBASIC3.84□□□□□ -1.79
VCPP55072 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
VCPP55072 BX842559.1-201ENST00000419615 532 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.84□□□□□ -1.79
VCPP55072 AC002075.2-201ENST00000425207 252 ntBASIC3.84□□□□□ -1.79
VCPP55072 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCPP55072 DEFB130D-201ENST00000426866 237 ntBASIC3.84□□□□□ -1.79
VCPP55072 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms