Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC019226.2-201ENST00000625973 424 ntBASIC3.84□□□□□ -1.79
PDX1P52945 MIR4278-201ENST00000636094 69 ntBASIC3.84□□□□□ -1.79
PDX1P52945 AC068620.4-201ENST00000636730 1182 ntBASIC3.84□□□□□ -1.79
PDX1P52945 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDX1P52945 AC107982.1-201ENST00000507171 1300 ntBASIC3.84□□□□□ -1.79
PDX1P52945 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDX1P52945 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
PDX1P52945 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDX1P52945 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDX1P52945 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PDX1P52945 MARK2P15-201ENST00000432204 2186 ntBASIC3.83□□□□□ -1.8
PDX1P52945 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDX1P52945 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
PDX1P52945 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.83□□□□□ -1.8
PDX1P52945 SNORD74.4-201ENST00000364129 80 ntBASIC3.83□□□□□ -1.8
PDX1P52945 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDX1P52945 RNU6-157P-201ENST00000383957 107 ntBASIC3.83□□□□□ -1.8
PDX1P52945 RNU6-1226P-201ENST00000384317 107 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC119751.3-201ENST00000399720 670 ntBASIC3.83□□□□□ -1.8
PDX1P52945 RNU6-757P-201ENST00000410334 100 ntBASIC3.83□□□□□ -1.8
PDX1P52945 PGBD4P8-201ENST00000412993 562 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 RPL7P53-201ENST00000421245 739 ntBASIC3.83□□□□□ -1.8
PDX1P52945 SDCBPP2-201ENST00000424643 885 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 AL353748.1-201ENST00000440753 474 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 AL121877.1-201ENST00000453704 622 ntBASIC3.83□□□□□ -1.8
PDX1P52945 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 FGF7P3-201ENST00000454645 303 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 MTND2P14-201ENST00000482139 351 ntBASIC3.83□□□□□ -1.8
PDX1P52945 OR4G11P-201ENST00000492842 939 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 WBP1LP4-201ENST00000505043 344 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC010587.2-201ENST00000511727 448 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC026726.1-201ENST00000512859 601 ntBASIC3.83□□□□□ -1.8
PDX1P52945 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 ARL2BPP5-201ENST00000523141 481 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 MTATP6P15-201ENST00000527233 835 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.83□□□□□ -1.8
PDX1P52945 CYCSP30-201ENST00000546447 172 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ZNF321P-202ENST00000550843 495 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AL389895.1-201ENST00000554127 252 ntBASIC3.83□□□□□ -1.8
PDX1P52945 GTF2IP22-201ENST00000554443 182 ntBASIC3.83□□□□□ -1.8
PDX1P52945 DUXAP1-201ENST00000556632 463 ntBASIC3.83□□□□□ -1.8
PDX1P52945 SULT1C2P1-202ENST00000562418 459 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 RPL23AP87-202ENST00000573039 466 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC025627.2-201ENST00000576220 160 ntBASIC3.83□□□□□ -1.8
PDX1P52945 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.83□□□□□ -1.8
PDX1P52945 AC015726.1-201ENST00000602353 681 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ELOCP35-201ENST00000604289 336 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC012468.1-201ENST00000604888 430 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.83□□□□□ -1.8
PDX1P52945 AP001521.1-201ENST00000609150 300 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC005332.6-201ENST00000613178 446 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC090246.1-201ENST00000616499 426 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC121761.2-201ENST00000617300 689 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC120349.2-201ENST00000625002 298 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AP005264.7-201ENST00000625003 745 ntBASIC3.83□□□□□ -1.8
PDX1P52945 AC009093.8-201ENST00000641769 292 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ELL2P4-201ENST00000446870 1376 ntBASIC3.83□□□□□ -1.8
PDX1P52945 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 MTND5P28-201ENST00000438005 1594 ntBASIC3.83□□□□□ -1.8
PDX1P52945 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 AC074029.4-201ENST00000624796 1859 ntBASIC3.83□□□□□ -1.8
PDX1P52945 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDX1P52945 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDX1P52945 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDX1P52945 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDX1P52945 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.82□□□□□ -1.8
PDX1P52945 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.82□□□□□ -1.8
PDX1P52945 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 RNA5SP502-201ENST00000362694 119 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RNA5SP399-201ENST00000364003 117 ntBASIC3.82□□□□□ -1.8
PDX1P52945 RNU6-621P-201ENST00000364752 109 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MIR649-201ENST00000384843 97 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MIR708-201ENST00000390708 88 ntBASIC3.82□□□□□ -1.8
PDX1P52945 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PDX1P52945 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms