Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-415P-201ENST00000516252 97 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 NDUFS5P6-201ENST00000529136 295 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD4P46934 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD4P46934 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NEDD4P46934 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD4P46934 AC091515.1-201ENST00000548110 679 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AC087897.1-201ENST00000550134 156 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
NEDD4P46934 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD4P46934 AC106754.1-201ENST00000562632 1513 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD4P46934 MIR4509-3-201ENST00000578671 94 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 MIR4509-2-201ENST00000583920 94 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 SRGNP1-201ENST00000603392 451 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AC110741.2-201ENST00000605278 268 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 CYCSP41-201ENST00000616920 296 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 MIR4509-1-201ENST00000618224 94 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 AC018926.3-201ENST00000618841 406 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 BX649567.1-201ENST00000642071 1134 ntBASIC3.93□□□□□ -1.78
NEDD4P46934 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD4P46934 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD4P46934 AL512646.1-201ENST00000269395 1077 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NEDD4P46934 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD4P46934 MTCO2P8-201ENST00000412213 658 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD4P46934 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD4P46934 SFR1P2-201ENST00000421841 730 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 RPF2P1-201ENST00000424137 906 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 MTCYBP15-201ENST00000433123 1127 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD4P46934 AC004854.1-201ENST00000440356 349 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 Z75741.1-201ENST00000446793 314 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 DUXAP8-207ENST00000456786 622 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 UBE2V1P12-201ENST00000503954 474 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 AC018797.3-201ENST00000513388 1241 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.92□□□□□ -1.78
NEDD4P46934 LRRC6P1-201ENST00000532188 885 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 UBE2NP1-201ENST00000545592 458 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 AC011611.1-201ENST00000552179 197 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 HMGB3P26-201ENST00000560051 582 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 AL162713.1-201ENST00000604480 262 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 DUXAP10-204ENST00000612052 616 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 MIR8058-201ENST00000615737 89 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 AC109454.4-201ENST00000623411 649 ntBASIC3.92□□□□□ -1.78
NEDD4P46934 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD4P46934 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD4P46934 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD4P46934 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD4P46934 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NEDD4P46934 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD4P46934 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 AC025263.3-201ENST00000622965 1396 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 OR11H5P-202ENST00000641612 1325 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 SNORD46.1-201ENST00000364139 104 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 RPS7P9-201ENST00000414704 586 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 TAF13P2-201ENST00000416876 286 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 MTND4P3-201ENST00000417829 541 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 UBE2V1P5-201ENST00000440070 405 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 MTCO1P53-201ENST00000441633 699 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 RPL12P26-201ENST00000452430 487 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD4P46934 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD4P46934 RPL23AP67-201ENST00000465341 474 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AC091860.1-201ENST00000505723 432 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 APOOP4-201ENST00000513530 597 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 SNORA19.3-201ENST00000516165 130 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AC091163.3-201ENST00000518269 1144 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 SMARCE1P4-201ENST00000523647 241 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD4P46934 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NEDD4P46934 MTCO1P40-201ENST00000574371 625 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD4P46934 AC112220.2-201ENST00000605513 533 ntBASIC3.91□□□□□ -1.78
NEDD4P46934 AC009464.1-201ENST00000615731 469 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms