Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MTCO2P16-201ENST00000436962 677 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.52□□□□□ -1.69
CIITAP33076 AL591503.2-201ENST00000442314 1005 ntBASIC4.52□□□□□ -1.69
CIITAP33076 RAB11AP1-201ENST00000442978 646 ntBASIC4.52□□□□□ -1.69
CIITAP33076 MTCO2P7-201ENST00000446518 666 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC133473.1-201ENST00000455173 299 ntBASIC4.52□□□□□ -1.69
CIITAP33076 MTCO2P18-201ENST00000457151 658 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.52□□□□□ -1.69
CIITAP33076 PNPLA4P1-201ENST00000458328 305 ntBASIC4.52□□□□□ -1.69
CIITAP33076 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CIITAP33076 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.52□□□□□ -1.69
CIITAP33076 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 MTATP6P22-201ENST00000507369 598 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC005178.1-201ENST00000508392 440 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.52□□□□□ -1.69
CIITAP33076 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.52□□□□□ -1.69
CIITAP33076 HNRNPKP5-201ENST00000515300 253 ntBASIC4.52□□□□□ -1.69
CIITAP33076 RNA5SP135-201ENST00000517019 125 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.52□□□□□ -1.69
CIITAP33076 AC007115.1-201ENST00000546853 234 ntBASIC4.52□□□□□ -1.69
CIITAP33076 BNIP3P5-201ENST00000562290 498 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.52□□□□□ -1.69
CIITAP33076 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.52□□□□□ -1.69
CIITAP33076 AC015813.4-201ENST00000610469 179 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC090116.1-201ENST00000615679 446 ntBASIC4.52□□□□□ -1.69
CIITAP33076 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.52□□□□□ -1.69
CIITAP33076 AL607023.1-201ENST00000620045 248 ntBASIC4.52□□□□□ -1.69
CIITAP33076 AC007494.3-201ENST00000624660 743 ntBASIC4.52□□□□□ -1.69
CIITAP33076 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.52□□□□□ -1.69
CIITAP33076 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CIITAP33076 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.52□□□□□ -1.69
CIITAP33076 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CIITAP33076 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CIITAP33076 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CIITAP33076 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CIITAP33076 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CIITAP33076 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
CIITAP33076 Y_RNA.77-201ENST00000362962 107 ntBASIC4.51□□□□□ -1.69
CIITAP33076 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 SNORD116-23-201ENST00000384645 92 ntBASIC4.51□□□□□ -1.69
CIITAP33076 TMSB4XP8-201ENST00000402089 135 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL603766.1-201ENST00000407763 664 ntBASIC4.51□□□□□ -1.69
CIITAP33076 RNU2-42P-201ENST00000410697 113 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AC068533.2-201ENST00000411872 306 ntBASIC4.51□□□□□ -1.69
CIITAP33076 PRELID3BP11-201ENST00000414230 479 ntBASIC4.51□□□□□ -1.69
CIITAP33076 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.51□□□□□ -1.69
CIITAP33076 TMSB4XP6-201ENST00000415187 135 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.51□□□□□ -1.69
CIITAP33076 TMSB4XP1-201ENST00000424567 135 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL035407.1-201ENST00000429211 571 ntBASIC4.51□□□□□ -1.69
CIITAP33076 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.51□□□□□ -1.69
CIITAP33076 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.51□□□□□ -1.69
CIITAP33076 RPL7P59-201ENST00000447700 943 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL672167.3-201ENST00000465951 960 ntBASIC4.51□□□□□ -1.69
CIITAP33076 RPL30P6-201ENST00000475925 342 ntBASIC4.51□□□□□ -1.69
CIITAP33076 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 AC110792.1-201ENST00000491826 472 ntBASIC4.51□□□□□ -1.69
CIITAP33076 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.51□□□□□ -1.69
CIITAP33076 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 RNU6-885P-201ENST00000516607 104 ntBASIC4.51□□□□□ -1.69
CIITAP33076 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.51□□□□□ -1.69
CIITAP33076 GTF2IP8-201ENST00000560687 584 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.51□□□□□ -1.69
CIITAP33076 OR4K7P-201ENST00000580232 945 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.51□□□□□ -1.69
CIITAP33076 AC053481.4-201ENST00000583164 216 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AC022916.3-201ENST00000592961 742 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 AP000811.1-201ENST00000603803 651 ntBASIC4.51□□□□□ -1.69
CIITAP33076 MIR6500-201ENST00000622700 86 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AF246928.1-201ENST00000623768 87 ntBASIC4.51□□□□□ -1.69
CIITAP33076 MIR6715B-201ENST00000637172 77 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL773545.4-201ENST00000637262 310 ntBASIC4.51□□□□□ -1.69
CIITAP33076 AL513478.4-201ENST00000641636 310 ntBASIC4.51□□□□□ -1.69
CIITAP33076 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
CIITAP33076 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CIITAP33076 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.51□□□□□ -1.69
CIITAP33076 CR381670.1-201ENST00000624291 1693 ntBASIC4.51□□□□□ -1.69
CIITAP33076 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CIITAP33076 AL136964.1-201ENST00000622038 2990 ntBASIC4.5□□□□□ -1.69
CIITAP33076 Z99496.1-201ENST00000469424 1477 ntBASIC4.5□□□□□ -1.69
CIITAP33076 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms