Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AP000542.1-201ENST00000448473 371 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AL033528.1-201ENST00000453780 140 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 SNRPFP4-201ENST00000456366 242 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.39□□□□□ -1.71
EPHA3P29320 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA3P29320 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC087385.1-201ENST00000475062 312 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC008953.1-201ENST00000497334 318 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 RNF138P1-201ENST00000502765 546 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA3P29320 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA3P29320 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
EPHA3P29320 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA3P29320 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.39□□□□□ -1.71
EPHA3P29320 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.39□□□□□ -1.71
EPHA3P29320 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.39□□□□□ -1.71
EPHA3P29320 MTATP6P3-201ENST00000581686 676 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 MIR4512-201ENST00000583257 77 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA3P29320 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 YWHAQP7-201ENST00000603536 658 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AL139395.1-201ENST00000603662 160 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC025588.3-201ENST00000604182 274 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC112191.3-201ENST00000604371 277 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC131902.3-201ENST00000611767 581 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC008250.2-201ENST00000615261 205 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AL158196.1-201ENST00000616786 434 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AL445264.1-201ENST00000621719 171 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC018445.2-201ENST00000622987 260 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC091905.4-201ENST00000623432 202 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.39□□□□□ -1.71
EPHA3P29320 FAM157B-203ENST00000639350 358 ntBASIC4.39□□□□□ -1.71
EPHA3P29320 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA3P29320 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
EPHA3P29320 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.39□□□□□ -1.71
EPHA3P29320 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA3P29320 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHA3P29320 Y_RNA.6-201ENST00000362350 114 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 RNA5SP191-201ENST00000362585 102 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 SNORD82-201ENST00000365530 70 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 MIR93-201ENST00000385024 80 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 MIR513A2-201ENST00000385249 127 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 RPS3AP23-201ENST00000401762 784 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 Z98745.1-201ENST00000402553 494 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 SPTLC1P2-201ENST00000407089 121 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 RN7SKP267-201ENST00000410381 285 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 RNU6-248P-201ENST00000410720 107 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 MTCO1P17-201ENST00000411522 491 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 HMGB3P23-201ENST00000414981 585 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 GLRXP1-201ENST00000423261 334 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 AL356276.2-201ENST00000435919 558 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA3P29320 NANOGNBP1-201ENST00000448444 480 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC073850.1-201ENST00000449243 255 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 Z82190.1-201ENST00000454534 490 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 LARP1BP2-201ENST00000486594 519 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHA3P29320 AC015795.1-201ENST00000513669 327 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC108064.1-201ENST00000513791 460 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 MYL12AP1-201ENST00000518490 515 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 AP001880.2-201ENST00000538233 448 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHA3P29320 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EPHA3P29320 MIR3913-1-201ENST00000577744 102 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 MIR4443-201ENST00000585052 53 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC087763.1-201ENST00000603391 286 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AL160290.3-201ENST00000604869 165 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC010857.1-201ENST00000606398 594 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC092794.1-201ENST00000612734 582 ntBASIC4.38□□□□□ -1.71
EPHA3P29320 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHA3P29320 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.38□□□□□ -1.71
EPHA3P29320 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
EPHA3P29320 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHA3P29320 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms