Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.01□□□□□ -1.93
USF1P22415 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 RPS3AP9-201ENST00000417027 792 ntBASIC3.01□□□□□ -1.93
USF1P22415 AC006989.1-201ENST00000427212 131 ntBASIC3.01□□□□□ -1.93
USF1P22415 AC005019.1-201ENST00000436455 431 ntBASIC3.01□□□□□ -1.93
USF1P22415 CYCSP32-201ENST00000440548 321 ntBASIC3.01□□□□□ -1.93
USF1P22415 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.01□□□□□ -1.93
USF1P22415 AL500527.1-201ENST00000448532 255 ntBASIC3.01□□□□□ -1.93
USF1P22415 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 AC017015.1-201ENST00000477387 286 ntBASIC3.01□□□□□ -1.93
USF1P22415 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USF1P22415 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 OSBPL9P3-201ENST00000534523 595 ntBASIC3.01□□□□□ -1.93
USF1P22415 AL121576.1-201ENST00000556055 276 ntBASIC3.01□□□□□ -1.93
USF1P22415 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.01□□□□□ -1.93
USF1P22415 GTF2IP8-201ENST00000560687 584 ntBASIC3.01□□□□□ -1.93
USF1P22415 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 KLKP1-201ENST00000595979 403 ntBASIC3.01□□□□□ -1.93
USF1P22415 ZNF92P2-201ENST00000600543 1059 ntBASIC3.01□□□□□ -1.93
USF1P22415 AC011816.2-201ENST00000607089 556 ntBASIC3.01□□□□□ -1.93
USF1P22415 AC112503.2-201ENST00000609005 552 ntBASIC3.01□□□□□ -1.93
USF1P22415 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.01□□□□□ -1.93
USF1P22415 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 MIR3651-201ENST00000630427 90 ntBASIC3.01□□□□□ -1.93
USF1P22415 AC068620.4-201ENST00000636730 1182 ntBASIC3.01□□□□□ -1.93
USF1P22415 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.01□□□□□ -1.93
USF1P22415 AC132825.7-201ENST00000638744 335 ntBASIC3.01□□□□□ -1.93
USF1P22415 OR6C71P-202ENST00000641886 1107 ntBASIC3.01□□□□□ -1.93
USF1P22415 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
USF1P22415 AC007256.1-201ENST00000392253 2765 ntBASIC3.01□□□□□ -1.93
USF1P22415 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF1P22415 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
USF1P22415 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.01□□□□□ -1.93
USF1P22415 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.01□□□□□ -1.93
USF1P22415 AC025263.3-201ENST00000622965 1396 ntBASIC3□□□□□ -1.93
USF1P22415 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 SNORA38.1-201ENST00000364172 131 ntBASIC3□□□□□ -1.93
USF1P22415 RNU1-33P-201ENST00000364249 162 ntBASIC3□□□□□ -1.93
USF1P22415 SNORA51.2-201ENST00000364595 132 ntBASIC3□□□□□ -1.93
USF1P22415 MIR634-201ENST00000385208 97 ntBASIC3□□□□□ -1.93
USF1P22415 SFR1P1-201ENST00000403720 688 ntBASIC3□□□□□ -1.93
USF1P22415 NDUFB4P4-201ENST00000404822 243 ntBASIC3□□□□□ -1.93
USF1P22415 HMGB3P20-201ENST00000417997 600 ntBASIC3□□□□□ -1.93
USF1P22415 OR1AA1P-201ENST00000419597 916 ntBASIC3□□□□□ -1.93
USF1P22415 PAICSP7-201ENST00000419829 962 ntBASIC3□□□□□ -1.93
USF1P22415 LAMTOR3P1-201ENST00000428620 370 ntBASIC3□□□□□ -1.93
USF1P22415 AC073508.1-201ENST00000428866 656 ntBASIC3□□□□□ -1.93
USF1P22415 MOB1AP1-201ENST00000430903 535 ntBASIC3□□□□□ -1.93
USF1P22415 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3□□□□□ -1.93
USF1P22415 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 RAB11AP1-201ENST00000442978 646 ntBASIC3□□□□□ -1.93
USF1P22415 RPS26P30-201ENST00000443431 335 ntBASIC3□□□□□ -1.93
USF1P22415 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3□□□□□ -1.93
USF1P22415 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3□□□□□ -1.93
USF1P22415 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 RBMY2UP-201ENST00000453474 324 ntBASIC3□□□□□ -1.93
USF1P22415 MTND2P30-201ENST00000456663 382 ntBASIC3□□□□□ -1.93
USF1P22415 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 AP002884.2-201ENST00000471647 395 ntBASIC3□□□□□ -1.93
USF1P22415 HMGB1P38-201ENST00000490557 577 ntBASIC3□□□□□ -1.93
USF1P22415 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3□□□□□ -1.93
USF1P22415 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
USF1P22415 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 HIGD1AP6-201ENST00000521833 279 ntBASIC3□□□□□ -1.93
USF1P22415 MTCYBP41-201ENST00000528913 1123 ntBASIC3□□□□□ -1.93
USF1P22415 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 AC008011.1-201ENST00000545989 227 ntBASIC3□□□□□ -1.93
USF1P22415 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3□□□□□ -1.93
USF1P22415 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 VN1R92P-201ENST00000598511 928 ntBASIC3□□□□□ -1.93
USF1P22415 AF131215.7-201ENST00000602443 707 ntBASIC3□□□□□ -1.93
USF1P22415 BNIP3P4-201ENST00000604946 565 ntBASIC3□□□□□ -1.93
USF1P22415 AL450489.1-201ENST00000612071 468 ntBASIC3□□□□□ -1.93
USF1P22415 AC005156.1-201ENST00000613371 573 ntBASIC3□□□□□ -1.93
USF1P22415 AL354696.1-201ENST00000614652 497 ntBASIC3□□□□□ -1.93
USF1P22415 AC006213.5-201ENST00000619673 288 ntBASIC3□□□□□ -1.93
USF1P22415 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3□□□□□ -1.93
USF1P22415 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms