Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC073465.2-201ENST00000440938 498 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 RN7SL197P-201ENST00000466981 299 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 IGLV2-34-201ENST00000490007 283 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 ARL4AP2-201ENST00000507378 601 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.02□□□□□ -1.45
ERCC3P19447 AC016559.2-201ENST00000510759 359 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.02□□□□□ -1.45
ERCC3P19447 MTND1P35-201ENST00000526739 508 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.02□□□□□ -1.45
ERCC3P19447 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.02□□□□□ -1.45
ERCC3P19447 MIR3936-201ENST00000584304 110 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 KC877982.1-201ENST00000602313 470 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AC007038.2-201ENST00000608095 740 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 AC104458.1-201ENST00000608243 463 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.02□□□□□ -1.45
ERCC3P19447 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
ERCC3P19447 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
ERCC3P19447 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ERCC3P19447 AC105074.1-201ENST00000623380 3095 ntBASIC6.02□□□□□ -1.45
ERCC3P19447 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 RNY3P13-201ENST00000365542 102 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 RNU6-1103P-201ENST00000384150 107 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC092447.6-201ENST00000414578 210 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AL807761.1-201ENST00000417622 171 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC137499.1-201ENST00000427602 88 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC3P19447 AL590399.6-201ENST00000446396 307 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 MTND2P24-201ENST00000453434 806 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC234775.1-201ENST00000454247 670 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC3P19447 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.01□□□□□ -1.45
ERCC3P19447 SCARNA20.4-201ENST00000516969 131 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 RNA5SP337-201ENST00000517007 109 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC3P19447 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC3P19447 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC3P19447 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 COX6CP3-201ENST00000580869 223 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 MIR4472-2-201ENST00000582069 67 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 MIR4691-201ENST00000583764 85 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC3P19447 AC011487.3-201ENST00000593607 453 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AL391646.1-201ENST00000603860 190 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC007363.1-201ENST00000604736 620 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AL136363.1-201ENST00000605349 337 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC010424.2-201ENST00000607594 443 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 OR6R2P-201ENST00000609216 300 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AC099669.2-201ENST00000616549 437 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AP006248.2-201ENST00000623309 592 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 AC073136.1-201ENST00000449426 2884 ntBASIC6.01□□□□□ -1.45
ERCC3P19447 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC3P19447 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC3P19447 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
ERCC3P19447 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
ERCC3P19447 RNY4P14-201ENST00000363656 96 ntBASIC6□□□□□ -1.45
ERCC3P19447 RNY3P14-201ENST00000384309 102 ntBASIC6□□□□□ -1.45
ERCC3P19447 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 OR4K11P-201ENST00000431829 904 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC092162.1-201ENST00000432828 434 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC000111.3-201ENST00000433478 193 ntBASIC6□□□□□ -1.45
ERCC3P19447 TIMM9P1-201ENST00000436122 256 ntBASIC6□□□□□ -1.45
ERCC3P19447 RHOT1P3-201ENST00000436571 331 ntBASIC6□□□□□ -1.45
ERCC3P19447 HMGB3P12-201ENST00000438745 556 ntBASIC6□□□□□ -1.45
ERCC3P19447 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6□□□□□ -1.45
ERCC3P19447 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AP000797.2-201ENST00000475768 606 ntBASIC6□□□□□ -1.45
ERCC3P19447 FCF1P3-201ENST00000496394 590 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms