Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 YWHAZP8-201ENST00000436935 731 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 ARF4P4-201ENST00000439608 520 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 TXNP1-201ENST00000441872 371 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 AC010401.1-201ENST00000463867 348 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 TRAV15-201ENST00000556680 249 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.51□□□□□ -1.85
XRCC1P18887 NIFKP8-201ENST00000560500 874 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC104072.1-201ENST00000568817 668 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
XRCC1P18887 CCDC58P3-201ENST00000590792 430 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 VN1R87P-201ENST00000596706 487 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC002487.1-201ENST00000604565 994 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC112503.1-201ENST00000608436 391 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 VN1R74P-201ENST00000613259 503 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC005156.1-201ENST00000613371 573 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AP003476.1-201ENST00000623984 516 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.51□□□□□ -1.85
XRCC1P18887 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 BX649567.1-201ENST00000642071 1134 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 AL133383.2-201ENST00000622958 2336 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
XRCC1P18887 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
XRCC1P18887 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
XRCC1P18887 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
XRCC1P18887 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
XRCC1P18887 MTCO1P24-201ENST00000515438 1558 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
XRCC1P18887 ELL2P4-201ENST00000446870 1376 ntBASIC3.51□□□□□ -1.85
XRCC1P18887 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 AP001148.1-201ENST00000624124 2359 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RNU5B-4P-201ENST00000363508 111 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RNU6-236P-201ENST00000363886 106 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RNU6-1257P-201ENST00000384625 110 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AL024507.1-201ENST00000412741 274 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 TAF13P2-201ENST00000416876 286 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RPS3AP9-201ENST00000417027 792 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 OSTCP5-201ENST00000425293 453 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC010881.1-201ENST00000433830 235 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 BX679664.1-201ENST00000434429 253 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC234064.1-201ENST00000436312 247 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.5□□□□□ -1.85
XRCC1P18887 RPS15AP1-201ENST00000457423 391 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC010468.1-201ENST00000461022 817 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AL049829.1-201ENST00000465411 156 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 SNRPGP3-201ENST00000469405 227 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RN7SL330P-201ENST00000469709 307 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC084357.1-201ENST00000473404 255 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC087879.1-201ENST00000474343 374 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC092451.1-201ENST00000480211 153 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RN7SL293P-201ENST00000481765 281 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC093801.2-201ENST00000503966 1050 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 PTGES3P3-201ENST00000511479 482 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
XRCC1P18887 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.5□□□□□ -1.85
XRCC1P18887 RNU6-579P-201ENST00000516879 102 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 RNU4-60P-201ENST00000517239 135 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.5□□□□□ -1.85
XRCC1P18887 AP003066.2-201ENST00000529375 555 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC103843.2-201ENST00000530523 682 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 MTND5P21-201ENST00000531961 522 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC023161.2-201ENST00000551218 780 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.5□□□□□ -1.85
XRCC1P18887 MIR3944-201ENST00000581277 108 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC008507.2-201ENST00000588402 1176 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AC007566.2-201ENST00000603642 413 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AP002802.2-201ENST00000605877 235 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.5□□□□□ -1.85
XRCC1P18887 AC253576.2-201ENST00000618815 580 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AL357559.1-201ENST00000622228 274 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 AL138955.1-201ENST00000622881 1040 ntBASIC3.5□□□□□ -1.85
XRCC1P18887 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms