Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC112492.1-201ENST00000449607 712 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 PNPLA4P1-201ENST00000458328 305 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AC022034.3-201ENST00000471393 478 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.96□□□□□ -1.78
PDGFRAP16234 RPL21P131-201ENST00000497298 483 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 SAP18P1-201ENST00000512058 390 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 SCARNA1-201ENST00000517138 166 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFRAP16234 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC027309.2-201ENST00000520566 192 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 OR5D17P-201ENST00000531492 978 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC087499.8-201ENST00000578406 226 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC090616.5-202ENST00000582111 297 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFRAP16234 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC113368.1-201ENST00000603736 382 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFRAP16234 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AL354976.1-201ENST00000613843 387 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFRAP16234 ZNF37BP-203ENST00000452306 1352 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 Z99496.1-201ENST00000469424 1477 ntBASIC3.96□□□□□ -1.78
PDGFRAP16234 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFRAP16234 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFRAP16234 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFRAP16234 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFRAP16234 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFRAP16234 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 NCAPGP1-201ENST00000505112 1814 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 AP001486.2-201ENST00000561652 5113 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFRAP16234 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFRAP16234 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PDGFRAP16234 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 RNU6-374P-201ENST00000364146 108 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 snoZ40.1-201ENST00000364540 72 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 HMGN2P8-201ENST00000391458 268 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 RN7SKP56-201ENST00000410513 331 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 RN7SKP27-201ENST00000410684 333 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 LUZP4P1-201ENST00000415420 344 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 MTND2P16-201ENST00000419987 799 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFRAP16234 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFRAP16234 RRM2P4-201ENST00000441721 562 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.95□□□□□ -1.78
PDGFRAP16234 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC239367.2-201ENST00000447309 705 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AC004022.1-201ENST00000447766 1066 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AL034418.1-201ENST00000448675 860 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFRAP16234 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 AL136126.1-201ENST00000473603 402 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 NIPA2P2-201ENST00000496376 1083 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFRAP16234 IGKV2-23-201ENST00000518729 323 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 ZNF192P1-203ENST00000565888 810 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC020914.4-201ENST00000597690 277 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC112230.1-201ENST00000604342 547 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 IGHV3-29-201ENST00000604817 344 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 AC069545.1-201ENST00000605671 358 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
PDGFRAP16234 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PDGFRAP16234 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFRAP16234 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms