Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CBX1P2-201ENST00000453841 458 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 BTF3P15-201ENST00000455606 336 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 AC079168.1-201ENST00000458741 345 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 AC126389.1-201ENST00000477436 290 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD8P13378 PTP4A1P4-201ENST00000512479 322 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 SCARNA20.4-201ENST00000516969 131 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD8P13378 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 OR5BN1P-201ENST00000532955 829 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD8P13378 AC053481.3-201ENST00000577881 843 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 GLUD1P4-201ENST00000590914 418 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD8P13378 AL022099.1-201ENST00000604551 712 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD8P13378 DNM1P47-203ENST00000571780 12667 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 MTND4P1-201ENST00000457501 1466 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HOXD8P13378 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD8P13378 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HOXD8P13378 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD8P13378 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
HOXD8P13378 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HOXD8P13378 OR1S2-201ENST00000302592 978 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 SNURFL-201ENST00000309296 343 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 Y_RNA.28-201ENST00000362554 111 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 RNU6-97P-201ENST00000363387 104 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 Y_RNA.414-201ENST00000384011 101 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 Y_RNA.530-201ENST00000384587 101 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 SNORA11-201ENST00000408789 128 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 RNU4-14P-201ENST00000410858 122 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC093156.1-201ENST00000440382 670 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 TRBV26-201ENST00000456572 344 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 AL049714.1-201ENST00000466686 347 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 RN7SKP66-201ENST00000516681 231 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AP001922.4-201ENST00000526967 290 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC105224.1-201ENST00000587055 421 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD8P13378 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD8P13378 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 AL353796.1-201ENST00000561542 3241 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD8P13378 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD8P13378 AC092747.4-201ENST00000620519 1861 ntBASIC5.92□□□□□ -1.46
HOXD8P13378 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXD8P13378 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXD8P13378 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXD8P13378 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 Z95114.1-201ENST00000624264 14574 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXD8P13378 AC100757.1-201ENST00000616872 1835 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 Y_RNA.187-201ENST00000363918 113 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 AC117470.1-201ENST00000381974 330 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 RNU6-1207P-201ENST00000384343 107 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 SNORD56.6-201ENST00000384569 71 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 MT-TR-201ENST00000387439 65 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 HMGB3P7-201ENST00000400214 611 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 MIR1182-201ENST00000408363 97 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXD8P13378 RPL37P10-201ENST00000412884 288 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 AC074085.1-201ENST00000413598 418 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 AC093162.1-201ENST00000419682 124 ntBASIC5.91□□□□□ -1.46
HOXD8P13378 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD8P13378 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms