Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.84□□□□□ -1.79
CD48P09326 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.84□□□□□ -1.79
CD48P09326 CDRT1-208ENST00000630868 794 ntBASIC3.84□□□□□ -1.79
CD48P09326 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD48P09326 AL513185.3-201ENST00000433335 1300 ntBASIC3.84□□□□□ -1.79
CD48P09326 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CD48P09326 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CD48P09326 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CD48P09326 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CD48P09326 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.8
CD48P09326 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.84□□□□□ -1.8
CD48P09326 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CD48P09326 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 HMGB1P5-201ENST00000255320 642 ntBASIC3.83□□□□□ -1.8
CD48P09326 AL512646.1-201ENST00000269395 1077 ntBASIC3.83□□□□□ -1.8
CD48P09326 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 RN7SKP227-201ENST00000364445 330 ntBASIC3.83□□□□□ -1.8
CD48P09326 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
CD48P09326 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.83□□□□□ -1.8
CD48P09326 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.83□□□□□ -1.8
CD48P09326 TRGV6-201ENST00000417928 299 ntBASIC3.83□□□□□ -1.8
CD48P09326 HMGB3P20-201ENST00000417997 600 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.83□□□□□ -1.8
CD48P09326 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.83□□□□□ -1.8
CD48P09326 Z93242.1-201ENST00000427102 353 ntBASIC3.83□□□□□ -1.8
CD48P09326 UBE2V1P5-201ENST00000440070 405 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 RPL23AP76-201ENST00000441860 458 ntBASIC3.83□□□□□ -1.8
CD48P09326 MTND5P2-201ENST00000442927 1142 ntBASIC3.83□□□□□ -1.8
CD48P09326 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.83□□□□□ -1.8
CD48P09326 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 RPL21P134-201ENST00000453468 483 ntBASIC3.83□□□□□ -1.8
CD48P09326 RFC5P1-201ENST00000454419 874 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC005229.2-201ENST00000456995 399 ntBASIC3.83□□□□□ -1.8
CD48P09326 PNPLA4P1-201ENST00000458328 305 ntBASIC3.83□□□□□ -1.8
CD48P09326 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 DYNLL1P6-201ENST00000503440 264 ntBASIC3.83□□□□□ -1.8
CD48P09326 RPF2P2-201ENST00000504693 896 ntBASIC3.83□□□□□ -1.8
CD48P09326 WBP1LP4-201ENST00000505043 344 ntBASIC3.83□□□□□ -1.8
CD48P09326 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 OR5H4P-201ENST00000510851 923 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC079395.1-201ENST00000510981 262 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC116353.3-201ENST00000511215 249 ntBASIC3.83□□□□□ -1.8
CD48P09326 OR5BM1P-201ENST00000512021 366 ntBASIC3.83□□□□□ -1.8
CD48P09326 IGKV2-36-201ENST00000519999 223 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC008562.1-201ENST00000521763 330 ntBASIC3.83□□□□□ -1.8
CD48P09326 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.83□□□□□ -1.8
CD48P09326 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.83□□□□□ -1.8
CD48P09326 HSPE1P5-201ENST00000561489 272 ntBASIC3.83□□□□□ -1.8
CD48P09326 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.83□□□□□ -1.8
CD48P09326 MIR3160-1-201ENST00000577972 85 ntBASIC3.83□□□□□ -1.8
CD48P09326 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 AC015726.3-201ENST00000624501 418 ntBASIC3.83□□□□□ -1.8
CD48P09326 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CD48P09326 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 AC074029.4-201ENST00000624796 1859 ntBASIC3.83□□□□□ -1.8
CD48P09326 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
CD48P09326 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
CD48P09326 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD48P09326 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CD48P09326 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CD48P09326 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.82□□□□□ -1.8
CD48P09326 SAGE2P-201ENST00000420011 2126 ntBASIC3.82□□□□□ -1.8
CD48P09326 AC093775.1-201ENST00000624154 1868 ntBASIC3.82□□□□□ -1.8
CD48P09326 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.82□□□□□ -1.8
CD48P09326 AC119744.1-201ENST00000454746 1715 ntBASIC3.82□□□□□ -1.8
CD48P09326 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.82□□□□□ -1.8
CD48P09326 SGO1P2-201ENST00000429458 1589 ntBASIC3.82□□□□□ -1.8
CD48P09326 AL049737.1-201ENST00000413920 1403 ntBASIC3.82□□□□□ -1.8
CD48P09326 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD48P09326 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CD48P09326 ATP5F1P3-201ENST00000397213 657 ntBASIC3.82□□□□□ -1.8
CD48P09326 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
CD48P09326 MIR1193-201ENST00000408109 78 ntBASIC3.82□□□□□ -1.8
CD48P09326 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.82□□□□□ -1.8
CD48P09326 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CD48P09326 MORF4L1P6-201ENST00000418771 268 ntBASIC3.82□□□□□ -1.8
CD48P09326 PTP4A1P5-201ENST00000420305 455 ntBASIC3.82□□□□□ -1.8
CD48P09326 USP9YP26-201ENST00000421008 661 ntBASIC3.82□□□□□ -1.8
CD48P09326 AC002075.2-201ENST00000425207 252 ntBASIC3.82□□□□□ -1.8
CD48P09326 DPRXP1-201ENST00000426312 460 ntBASIC3.82□□□□□ -1.8
CD48P09326 VN1R108P-201ENST00000431580 830 ntBASIC3.82□□□□□ -1.8
CD48P09326 ATP5F1P1-201ENST00000433775 569 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms