Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.75□□□□□ -1.81
LMX1BO60663 AC007899.1-201ENST00000412776 775 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMX1BO60663 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.75□□□□□ -1.81
LMX1BO60663 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.75□□□□□ -1.81
LMX1BO60663 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.75□□□□□ -1.81
LMX1BO60663 MTND1P28-201ENST00000435623 950 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AL512286.1-201ENST00000439244 400 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC114495.1-201ENST00000441274 436 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.75□□□□□ -1.81
LMX1BO60663 PTMAP3-201ENST00000447474 330 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.75□□□□□ -1.81
LMX1BO60663 DHFRP3-201ENST00000455595 559 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 ARPC3P2-201ENST00000457786 533 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 RN7SL98P-201ENST00000462271 300 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 RPS7P7-201ENST00000463499 571 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC010307.1-201ENST00000467206 836 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC091167.1-201ENST00000492017 396 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.75□□□□□ -1.81
LMX1BO60663 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.75□□□□□ -1.81
LMX1BO60663 AC010285.3-201ENST00000511668 676 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMX1BO60663 RNU6-405P-201ENST00000516637 110 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 RNU6-1261P-201ENST00000517194 104 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 RN7SKP283-201ENST00000517197 270 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 IGKV2-36-201ENST00000519999 223 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.75□□□□□ -1.81
LMX1BO60663 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.75□□□□□ -1.81
LMX1BO60663 HIGD1AP6-201ENST00000521833 279 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.75□□□□□ -1.81
LMX1BO60663 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.75□□□□□ -1.81
LMX1BO60663 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.75□□□□□ -1.81
LMX1BO60663 AC015871.2-201ENST00000603605 948 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC243756.2-201ENST00000618406 463 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC018816.2-201ENST00000621460 353 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AL356266.1-201ENST00000623311 483 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC015726.3-201ENST00000624501 418 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 AC006927.3-201ENST00000638789 384 ntBASIC3.75□□□□□ -1.81
LMX1BO60663 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMX1BO60663 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMX1BO60663 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LMX1BO60663 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.75□□□□□ -1.81
LMX1BO60663 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.75□□□□□ -1.81
LMX1BO60663 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LMX1BO60663 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMX1BO60663 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 AC107982.1-201ENST00000507171 1300 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 AC090017.1-201ENST00000548612 1779 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC068254.2-201ENST00000623938 3577 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 AL512646.1-201ENST00000269395 1077 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 RNA5SP366-201ENST00000365454 123 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 MIR3065-201ENST00000390137 79 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC007066.1-201ENST00000392902 381 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 MIR1284-201ENST00000408337 120 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 RNU2-66P-201ENST00000410650 161 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 RNU6-628P-201ENST00000410675 107 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.74□□□□□ -1.81
LMX1BO60663 RPS15AP38-201ENST00000413110 372 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AL136133.1-201ENST00000413694 376 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 FCF1P2-201ENST00000415284 583 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 RPL23AP38-201ENST00000423801 469 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC073069.1-201ENST00000428657 441 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 MTCO3P21-201ENST00000430791 643 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 RPS24P8-201ENST00000431490 402 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AL513175.1-201ENST00000431492 780 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 B3GNT2P1-201ENST00000434960 952 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 RPS3AP54-201ENST00000435535 734 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 AL357520.1-201ENST00000441557 453 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 MTND1P1-201ENST00000445453 368 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 COX6CP12-201ENST00000446748 202 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 EEF1A1P1-201ENST00000447052 739 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.74□□□□□ -1.81
LMX1BO60663 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.74□□□□□ -1.81
LMX1BO60663 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC005229.2-201ENST00000456995 399 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.74□□□□□ -1.81
LMX1BO60663 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC053481.1-201ENST00000467217 306 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.74□□□□□ -1.81
LMX1BO60663 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.74□□□□□ -1.81
LMX1BO60663 RPL9P33-201ENST00000484311 566 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 UBA52P3-201ENST00000491303 382 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.74□□□□□ -1.81
LMX1BO60663 RNA5SP154-201ENST00000516193 111 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC008802.1-201ENST00000519121 791 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms