Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC007224.1-201ENST00000564410 144 ntBASIC4.15□□□□□ -1.75
LDB2O43679 ROCK1P1-201ENST00000573767 549 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC020914.6-201ENST00000594327 272 ntBASIC4.15□□□□□ -1.75
LDB2O43679 MTCYBP22-201ENST00000603788 447 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC092354.1-201ENST00000606057 376 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC024560.3-201ENST00000608482 349 ntBASIC4.15□□□□□ -1.75
LDB2O43679 MIR7151-201ENST00000617477 60 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AL445567.2-201ENST00000618935 498 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AP005264.7-201ENST00000625003 745 ntBASIC4.15□□□□□ -1.75
LDB2O43679 AC090582.1-201ENST00000636321 199 ntBASIC4.15□□□□□ -1.75
LDB2O43679 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.75
LDB2O43679 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 OR5BR1P-201ENST00000524992 1330 ntBASIC4.15□□□□□ -1.75
LDB2O43679 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
LDB2O43679 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LDB2O43679 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LDB2O43679 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LDB2O43679 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
LDB2O43679 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LDB2O43679 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LDB2O43679 RNU4-21P-201ENST00000362802 126 ntBASIC4.14□□□□□ -1.75
LDB2O43679 Y_RNA.302-201ENST00000364997 102 ntBASIC4.14□□□□□ -1.75
LDB2O43679 RPS26P8-201ENST00000393490 348 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AL450338.1-201ENST00000407987 512 ntBASIC4.14□□□□□ -1.75
LDB2O43679 TPMTP3-201ENST00000411928 735 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AL031779.1-201ENST00000415663 330 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.14□□□□□ -1.75
LDB2O43679 AL049610.1-201ENST00000423374 372 ntBASIC4.14□□□□□ -1.75
LDB2O43679 DLGAP5P1-201ENST00000430307 464 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.14□□□□□ -1.75
LDB2O43679 KATNBL1P6-201ENST00000453433 915 ntBASIC4.14□□□□□ -1.75
LDB2O43679 USP9YP10-201ENST00000454868 628 ntBASIC4.14□□□□□ -1.75
LDB2O43679 RPL36AP13-201ENST00000457490 317 ntBASIC4.14□□□□□ -1.75
LDB2O43679 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.14□□□□□ -1.75
LDB2O43679 RPL7AP28-201ENST00000464513 571 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
LDB2O43679 AC013828.1-201ENST00000481845 158 ntBASIC4.14□□□□□ -1.75
LDB2O43679 SNX5P1-201ENST00000505757 1041 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.14□□□□□ -1.75
LDB2O43679 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.14□□□□□ -1.75
LDB2O43679 RN7SKP21-201ENST00000516503 220 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 SOD1P3-201ENST00000518682 454 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 AP003730.1-201ENST00000524605 285 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.14□□□□□ -1.75
LDB2O43679 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.14□□□□□ -1.75
LDB2O43679 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.14□□□□□ -1.75
LDB2O43679 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 HMGB3P26-201ENST00000560051 582 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 AC008507.1-201ENST00000587506 734 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.14□□□□□ -1.75
LDB2O43679 AC083899.3-201ENST00000603413 594 ntBASIC4.14□□□□□ -1.75
LDB2O43679 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.14□□□□□ -1.75
LDB2O43679 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.14□□□□□ -1.75
LDB2O43679 AC106028.5-201ENST00000610332 395 ntBASIC4.14□□□□□ -1.75
LDB2O43679 SNX18P1Y-201ENST00000616231 511 ntBASIC4.14□□□□□ -1.75
LDB2O43679 MIR8059-201ENST00000620427 81 ntBASIC4.14□□□□□ -1.75
LDB2O43679 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.14□□□□□ -1.75
LDB2O43679 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.14□□□□□ -1.75
LDB2O43679 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LDB2O43679 ZNF37BP-203ENST00000452306 1352 ntBASIC4.14□□□□□ -1.75
LDB2O43679 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LDB2O43679 AC116667.1-201ENST00000604855 2072 ntBASIC4.14□□□□□ -1.75
LDB2O43679 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 AC009951.1-201ENST00000623674 2614 ntBASIC4.13□□□□□ -1.75
LDB2O43679 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LDB2O43679 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
LDB2O43679 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LDB2O43679 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 Y_RNA.553-201ENST00000384670 102 ntBASIC4.13□□□□□ -1.75
LDB2O43679 Y_RNA.559-201ENST00000384686 107 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC006366.1-201ENST00000422002 759 ntBASIC4.13□□□□□ -1.75
LDB2O43679 VDAC1P6-201ENST00000430062 855 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.13□□□□□ -1.75
LDB2O43679 UBE2FP3-201ENST00000436366 524 ntBASIC4.13□□□□□ -1.75
LDB2O43679 COX6CP2-201ENST00000444980 225 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.13□□□□□ -1.75
LDB2O43679 RPL36AP33-201ENST00000450395 310 ntBASIC4.13□□□□□ -1.75
LDB2O43679 RPL26P28-201ENST00000451325 435 ntBASIC4.13□□□□□ -1.75
LDB2O43679 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.13□□□□□ -1.75
LDB2O43679 IFNWP4-201ENST00000453148 294 ntBASIC4.13□□□□□ -1.75
LDB2O43679 MTND6P6-201ENST00000478031 263 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.13□□□□□ -1.75
LDB2O43679 RPS27AP13-201ENST00000498403 237 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC006499.5-201ENST00000505037 514 ntBASIC4.13□□□□□ -1.75
LDB2O43679 AC091965.2-201ENST00000512324 613 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms