Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 NIPA2P2-201ENST00000496376 1083 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AC104057.1-201ENST00000515547 497 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 SNORA70.19-201ENST00000516717 90 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
CLDN3O15551 MTCYBP41-201ENST00000528913 1123 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 AC093510.2-201ENST00000562820 896 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN3O15551 ELOCP35-201ENST00000604289 336 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AL512506.1-201ENST00000613918 449 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 MIR7975-201ENST00000619350 68 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AC048347.1-201ENST00000624621 427 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN3O15551 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN3O15551 AL512283.1-201ENST00000606756 1384 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CLDN3O15551 AL355578.1-201ENST00000607405 1328 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 SNORA7.2-201ENST00000364446 145 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 MIR607-201ENST00000385241 96 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN3O15551 AL138880.1-201ENST00000405824 642 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC097713.2-201ENST00000430199 356 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AL158071.1-201ENST00000430315 461 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 MOB1AP2-201ENST00000446060 614 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 RPL21P10-201ENST00000463521 490 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC008379.1-201ENST00000463655 464 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 SYPL1P1-201ENST00000473622 768 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AP000563.1-201ENST00000490865 758 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 RPL23AP55-201ENST00000498163 452 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 MTCO2P9-201ENST00000503214 694 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN3O15551 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.74□□□□□ -1.81
CLDN3O15551 OR8K4P-201ENST00000534608 872 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 NCAPGP2-201ENST00000557911 754 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 ZNF192P1-203ENST00000565888 810 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN3O15551 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.74□□□□□ -1.81
CLDN3O15551 MIR3944-201ENST00000581277 108 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN3O15551 AP004247.3-201ENST00000608682 624 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 U7.8-201ENST00000619968 63 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 AC004777.1-201ENST00000624317 287 ntBASIC3.74□□□□□ -1.81
CLDN3O15551 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN3O15551 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CLDN3O15551 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLDN3O15551 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 ZNF849P-201ENST00000594711 1566 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 MTCO1P4-201ENST00000520516 1409 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 SNORA63.1-201ENST00000362493 131 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RNU6-263P-201ENST00000363811 107 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RNA5SP72-201ENST00000364442 117 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 Y_RNA.493-201ENST00000384422 102 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 MIR184-201ENST00000384962 84 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 HSPE1P26-201ENST00000405341 275 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN3O15551 OR51A3P-201ENST00000413596 924 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 HSFY4P-201ENST00000415994 1181 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC005019.1-201ENST00000436455 431 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 CFTRP1-201ENST00000456646 183 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC004801.2-202ENST00000463559 283 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 PRDX3P4-201ENST00000470828 747 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 RPL7P49-201ENST00000471402 708 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 HMGB1P38-201ENST00000490557 577 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 WBP1LP4-201ENST00000505043 344 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 AC008628.1-201ENST00000508663 265 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN3O15551 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN3O15551 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.73□□□□□ -1.81
CLDN3O15551 RN7SKP116-201ENST00000516902 319 ntBASIC3.73□□□□□ -1.81
CLDN3O15551 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN3O15551 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN3O15551 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN3O15551 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms