Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORD82-201ENST00000365530 70 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 MIR670-201ENST00000390142 98 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 ANAPC10P1-201ENST00000395991 556 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC004552.1-201ENST00000419089 348 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 ATP5F1P1-201ENST00000433775 569 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC127537.2-201ENST00000439258 465 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RPS11P1-201ENST00000451072 473 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 PABPC1P3-201ENST00000469174 459 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RPS26P3-201ENST00000470205 348 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC090543.2-201ENST00000483963 348 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC004057.1-201ENST00000485827 348 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RN7SL271P-201ENST00000487601 295 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC108729.1-201ENST00000487812 947 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 Vault.1-201ENST00000516474 102 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 OR4R3P-201ENST00000525084 838 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AP000619.3-201ENST00000535634 1127 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC079171.1-201ENST00000568788 914 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL391001.1-201ENST00000602747 715 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 DUXAP3-201ENST00000603616 594 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC124312.4-201ENST00000605533 310 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL159169.3-201ENST00000608871 561 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC009318.4-201ENST00000620496 486 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC004943.3-201ENST00000624116 600 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 AC120349.2-201ENST00000625002 298 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 NOL8P1-201ENST00000508336 3529 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.63□□□□□ -1.83
NPIPA3F8WFD2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC106871.1-201ENST00000568324 3102 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 EXOC5P1-201ENST00000510543 1969 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 RNU6-216P-201ENST00000363282 104 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 Y_RNA.192-201ENST00000363977 102 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 ARF4P3-201ENST00000397387 509 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 EIF5P1-201ENST00000400019 1231 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 MTND4LP20-201ENST00000402379 270 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL024474.1-201ENST00000404655 591 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL450338.1-201ENST00000407987 512 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AMD1P2-201ENST00000412936 992 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL389915.1-201ENST00000422463 466 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 ELOCP18-201ENST00000434209 337 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC084290.1-201ENST00000434995 374 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 MTCO2P25-201ENST00000447065 681 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC004022.1-201ENST00000447766 1066 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 RPL12P26-201ENST00000452430 487 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 RPS20P32-201ENST00000456044 356 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AL139099.1-201ENST00000497398 403 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 RNA5SP154-201ENST00000516193 111 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 IGKV2-38-201ENST00000517443 247 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC091515.1-201ENST00000548110 679 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 LARP7P2-201ENST00000575306 125 ntBASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.62□□□□□ -1.83
NPIPA3F8WFD2 AC114878.2-201ENST00000604863 1251 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms