Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RPL26P28-201ENST00000451325 435 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 MRPL42P4-201ENST00000453267 443 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 RPL21P10-201ENST00000463521 490 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 GTF2IP9-201ENST00000502460 301 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 TRAV31-201ENST00000502780 342 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC113420.1-201ENST00000507903 571 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC110792.2-201ENST00000510278 224 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-202P-201ENST00000515998 96 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC115621.1-201ENST00000604653 858 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC105148.1-201ENST00000604961 409 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AL355365.1-201ENST00000616480 294 ntBASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.66□□□□□ -1.82
NEDD8-MDP1E9PL57 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
NEDD8-MDP1E9PL57 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
NEDD8-MDP1E9PL57 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU4-35P-201ENST00000362588 141 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 HSPE1P8-201ENST00000406997 288 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 KRR1P1-201ENST00000419430 803 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 MTCYBP32-201ENST00000427945 1084 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC097713.2-201ENST00000430199 356 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL365396.1-201ENST00000430854 671 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 RPS3AP12-201ENST00000443616 753 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 NPM1P13-201ENST00000452663 865 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 RPS15AP1-201ENST00000457423 391 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 RPS4XP10-201ENST00000465034 731 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AP000893.1-201ENST00000474462 794 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 GAPDHP39-201ENST00000481866 979 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 HMGB1P21-201ENST00000502313 581 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC011352.3-201ENST00000505162 593 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC023632.1-201ENST00000518463 375 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 SERPINE4P-201ENST00000554978 281 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC044913.1-201ENST00000557200 430 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 EIF5A2P1-201ENST00000564027 460 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AC009237.15-201ENST00000610252 501 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NEDD8-MDP1E9PL57 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR423-201ENST00000362201 94 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU4-51P-201ENST00000364206 140 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORD6-201ENST00000365444 73 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL079342.2-201ENST00000403367 482 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 GSTA8P-201ENST00000404253 637 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms