Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC66A2RUB6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC66A2RUB6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC66A2RUB6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC66A2RUB6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC66A2RUB6 AL445487.1-201ENST00000415694 1580 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL445437.1-201ENST00000623157 3087 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 RNA5SP502-201ENST00000362694 119 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 SNORA17.1-201ENST00000362945 126 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 RHOT1P2-201ENST00000366423 333 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 MIR1277-201ENST00000408536 78 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 VDAC1P9-201ENST00000412766 841 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 SPA17P1-201ENST00000416656 452 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL353597.2-202ENST00000434901 373 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC002381.1-201ENST00000447049 280 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 OR52A4P-201ENST00000472867 958 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 PTGES3P3-201ENST00000511479 482 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 ARL2BPP6-201ENST00000512757 439 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC010342.1-201ENST00000514047 877 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC012339.2-201ENST00000523996 453 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL049779.2-201ENST00000553847 315 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 MIR4504-201ENST00000577413 92 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC005191.1-201ENST00000603950 358 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 COX6CP4-201ENST00000605798 228 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC004067.1-201ENST00000608733 700 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC116447.1-201ENST00000613153 453 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AL445264.1-201ENST00000621719 171 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 AC110994.2-201ENST00000635481 492 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 MIR3688-2-201ENST00000636963 87 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC66A2RUB6 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.25□□□□□ -1.57
CCDC66A2RUB6 CR848007.1-201ENST00000442354 1699 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC011493.1-201ENST00000596753 1632 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 RNA5SP52-201ENST00000362448 134 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 RNY4P34-201ENST00000364779 95 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 Y_RNA.390-201ENST00000383932 102 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 Y_RNA.450-201ENST00000384198 113 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 MTCO3P40-201ENST00000392516 676 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC009480.2-201ENST00000422916 432 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 RPL22P17-201ENST00000438729 315 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AP000542.1-201ENST00000448473 371 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 USP9YP34-201ENST00000453983 808 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC009127.1-201ENST00000467090 155 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 COPS8P2-201ENST00000473228 627 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 RN7SL799P-201ENST00000475891 298 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC104563.1-201ENST00000476147 376 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 UBA52P7-201ENST00000486088 380 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 RN7SL30P-201ENST00000488416 306 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 FTH1P24-201ENST00000503502 462 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 KCTD9P5-201ENST00000504141 1170 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 FAM92A1P2-202ENST00000504766 877 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 PGAM1P13-201ENST00000507497 754 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC108475.1-201ENST00000507880 950 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC093824.1-201ENST00000508796 343 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC022861.1-201ENST00000522981 663 ntBASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC66A2RUB6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms