Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 OR8G2P-201ENST00000412796 908 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR51AB1P-201ENST00000429046 620 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RPL7P34-201ENST00000433316 712 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL008629.1-201ENST00000438615 184 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MTCO3P16-201ENST00000454456 754 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MTCO3P20-201ENST00000454926 688 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR4G11P-201ENST00000492842 939 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC092045.1-201ENST00000495716 1231 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SNORA3.4-201ENST00000515969 96 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RN7SKP83-201ENST00000516512 178 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP003730.1-201ENST00000524605 285 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR8L1P-201ENST00000534005 955 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ZNF321P-202ENST00000550843 495 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MIR3138-201ENST00000585238 82 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ARF4P1-201ENST00000605447 541 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NMD3P1-201ENST00000439704 1488 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL390862.1-201ENST00000635467 1469 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC026951.1-201ENST00000559530 2459 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MIR199A2-201ENST00000385289 110 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ARF4P3-201ENST00000397387 509 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RN7SKP177-201ENST00000410567 355 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL31P45-201ENST00000419532 356 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS12P23-201ENST00000419579 400 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC068287.1-201ENST00000430283 295 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 VN1R10P-201ENST00000447106 875 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL29P29-201ENST00000448725 423 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC092757.1-201ENST00000467293 467 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RN7SL459P-201ENST00000481078 302 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC020593.1-201ENST00000507399 299 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNY4P37-201ENST00000516225 96 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NDUFA5P2-201ENST00000519723 344 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 UBTFL10-201ENST00000528532 562 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC008127.2-201ENST00000549925 1075 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LARP7P2-201ENST00000575306 125 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR4G1P-201ENST00000588632 938 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NIFKP6-201ENST00000598115 845 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CLIC4P2-201ENST00000601934 717 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC103881.1-201ENST00000603476 538 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL139418.1-201ENST00000613613 177 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 Z99129.2-201ENST00000619967 314 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC120349.3-201ENST00000624377 529 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms