Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC096632.1-201ENST00000427395 310 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 BX679664.1-201ENST00000434429 253 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC087312.1-201ENST00000471411 480 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AL139099.1-201ENST00000497398 403 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 RNA5SP164-201ENST00000516533 110 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AP001636.2-201ENST00000525517 696 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 RN7SL703P-201ENST00000578485 302 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 MIR5047-201ENST00000579212 100 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AL450489.1-201ENST00000612071 468 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 AL354798.1-201ENST00000622505 329 ntBASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.52□□□□□ -1.85
AP4B1Q9Y6B7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL513302.2-201ENST00000562313 1842 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL355578.1-201ENST00000607405 1328 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 ZNF734P-201ENST00000419494 1534 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 RNU6-921P-201ENST00000384361 107 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MT-TC-201ENST00000387405 66 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MCTS2P-201ENST00000394552 546 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 OFD1P18Y-201ENST00000420889 959 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MTCYBP15-201ENST00000433123 1127 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MTCO3P35-201ENST00000485582 781 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC104629.1-201ENST00000494226 508 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC048346.1-201ENST00000510247 144 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 NPM1P41-201ENST00000512920 831 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MTCO2P32-201ENST00000514865 403 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 IGKV2D-36-201ENST00000518643 226 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC068339.2-201ENST00000534395 618 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC092470.1-201ENST00000546187 132 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 ZNF971P-201ENST00000562068 1249 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC106785.1-201ENST00000565935 262 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC015726.1-201ENST00000602353 681 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 RPAP2P1-201ENST00000603626 1168 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL354760.1-201ENST00000608357 643 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL590282.1-201ENST00000610379 1136 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC098679.5-201ENST00000624394 571 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 AL672296.1-201ENST00000427780 2158 ntBASIC3.51□□□□□ -1.85
AP4B1Q9Y6B7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 RNA5SP235-201ENST00000365411 114 ntBASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 MIR649-201ENST00000384843 97 ntBASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 MIR199A2-201ENST00000385289 110 ntBASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
AP4B1Q9Y6B7 AL035405.1-201ENST00000400795 710 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms