Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL583834.1-201ENST00000406943 343 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 EI24P1-201ENST00000416584 867 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 MTND4LP10-201ENST00000435146 291 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC116347.2-201ENST00000514912 523 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 MIR4307-201ENST00000582802 84 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL031176.1-201ENST00000604554 466 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL023881.1-201ENST00000621088 301 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL356585.4-201ENST00000623078 1229 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AL356121.2-201ENST00000624715 780 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 AC000123.3-201ENST00000624029 4975 ntBASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU6-1207P-201ENST00000384343 107 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RNA5SP397-201ENST00000391323 118 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 Z98745.1-201ENST00000402553 494 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RPS7P15-201ENST00000415804 584 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AL137014.1-201ENST00000420490 1226 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC109583.1-201ENST00000432156 268 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 SKP1P1-201ENST00000438081 489 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC108734.1-201ENST00000439549 399 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 UBE2V1P3-201ENST00000439651 417 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RPL36AP41-201ENST00000493820 306 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC080014.1-201ENST00000496877 1201 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RN7SKP92-201ENST00000517266 244 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC209154.1-201ENST00000582156 337 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 SNORD84-203ENST00000584275 78 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 TPMTP1-201ENST00000592307 737 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC005255.1-201ENST00000593748 216 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC019193.2-201ENST00000610012 634 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC009237.17-201ENST00000618111 748 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 MIR7641-1-201ENST00000627518 61 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC025048.6-202ENST00000627667 438 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 AC093591.3-201ENST00000634516 308 ntBASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL4A3BPQ9Y5P4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 Y_RNA.97-201ENST00000363094 102 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU1-32P-201ENST00000363937 159 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 RNU6-335P-201ENST00000364563 113 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 MTCO3P12-201ENST00000416718 547 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 Z97055.1-201ENST00000419730 712 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 CHIAP3-201ENST00000423668 1133 ntBASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.17□□□□□ -1.58
COL4A3BPQ9Y5P4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms