Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AP005435.3-201ENST00000531260 3198 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-99P-201ENST00000364721 107 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU11-4P-201ENST00000391149 133 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 BX284632.2-201ENST00000421091 399 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 FAR2P4-202ENST00000425399 584 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC064862.5-201ENST00000440618 334 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 GAPDHP23-201ENST00000444823 993 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL359955.2-201ENST00000445380 353 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL10P17-201ENST00000453852 316 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU7-167P-201ENST00000459160 62 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 SNRPCP11-201ENST00000492453 205 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 TBCAP3-201ENST00000512475 312 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORA14.1-201ENST00000516113 141 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 Y_RNA.721-201ENST00000517207 102 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC090115.3-201ENST00000553218 849 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 MIR5692C1-201ENST00000585309 91 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL669831.4-202ENST00000590817 238 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AL138693.1-201ENST00000622219 129 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC025470.1-201ENST00000510053 2032 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC011755.1-201ENST00000623763 2049 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 AC125336.1-201ENST00000508893 2827 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 MTCO1P24-201ENST00000515438 1558 ntBASIC5.97□□□□□ -1.45
PCDHGA11Q9Y5H2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHGA11Q9Y5H2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
PCDHGA11Q9Y5H2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.96□□□□□ -1.45
PCDHGA11Q9Y5H2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHGA11Q9Y5H2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
PCDHGA11Q9Y5H2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC007529.1-201ENST00000418574 2178 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC004158.1-201ENST00000564508 4319 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNA5SP346-201ENST00000363541 121 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNA5SP77-201ENST00000365394 120 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-946P-201ENST00000383878 107 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.428-201ENST00000384078 102 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-434P-201ENST00000384376 107 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RNU6-393P-201ENST00000384475 107 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL157702.1-201ENST00000398764 426 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 RPLP0P7-201ENST00000416050 667 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 UBE2FP1-201ENST00000416536 447 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 DPH3P2-201ENST00000422618 250 ntBASIC5.96□□□□□ -1.46
PCDHGA11Q9Y5H2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms