Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 RNA5SP509-201ENST00000364577 119 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 RPS3AP24-201ENST00000407896 734 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 CBX1P1-201ENST00000440184 427 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 RPS7P5-201ENST00000441482 581 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 NANOGNBP1-201ENST00000448444 480 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 FGF7P6-202ENST00000451282 293 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 MTCO1P30-201ENST00000515244 580 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-718P-201ENST00000516166 105 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 IGHV3-32-201ENST00000519182 355 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC239860.2-201ENST00000525886 270 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 DEFB108A-201ENST00000530110 222 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AL161713.1-201ENST00000555538 145 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC105129.1-201ENST00000560250 297 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 KPNA2P3-201ENST00000584190 848 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC005771.1-201ENST00000585581 349 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC083760.1-201ENST00000589621 670 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 SEPT7P9-203ENST00000604116 343 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 CR392039.4-201ENST00000624968 501 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 OR5H6-203ENST00000642105 978 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC090229.1-201ENST00000590983 1609 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AC092162.3-201ENST00000624511 1624 ntBASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTDP1Q9Y5B0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 RN7SKP227-201ENST00000364445 330 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC068538.1-201ENST00000376856 336 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 RPL17P12-201ENST00000413391 526 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC004690.1-201ENST00000418216 328 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 Z97055.1-201ENST00000419730 712 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC122718.1-201ENST00000439448 744 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 RPL7P59-201ENST00000447700 943 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 FAM133DP-201ENST00000464802 691 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 SNX5P1-201ENST00000505757 1041 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 PRDX4P1-201ENST00000507189 574 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 RN7SKP122-201ENST00000515923 296 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC136624.4-201ENST00000573044 370 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC091135.1-201ENST00000585943 307 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC011477.5-201ENST00000586571 259 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 LARP7P1-201ENST00000605576 316 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC010857.1-201ENST00000606398 594 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC107214.2-201ENST00000608204 634 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC090517.2-201ENST00000614966 680 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC018926.3-201ENST00000618841 406 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AL356596.1-201ENST00000624230 379 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 AC079228.1-201ENST00000624774 1049 ntBASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.28□□□□□ -1.56
CTDP1Q9Y5B0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms