Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTCO1P56-201ENST00000401674 224 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 Z98941.1-201ENST00000407764 100 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RN7SKP27-201ENST00000410684 333 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 Z93242.1-201ENST00000427102 353 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AF228730.2-201ENST00000438784 848 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RPL23AP16-201ENST00000441715 421 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC239367.2-201ENST00000447309 705 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 MTCO3P2-201ENST00000457365 171 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RN7SL542P-201ENST00000467147 294 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC104164.3-201ENST00000467363 1258 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 OR5H5P-201ENST00000503164 928 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 DYNLL1P6-201ENST00000503440 264 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 SAP18P1-201ENST00000512058 390 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RN7SKP116-201ENST00000516902 319 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 RNU1-45P-201ENST00000517191 141 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC023632.4-201ENST00000517783 191 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 ZNF705CP-201ENST00000530515 889 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 MTCYBP27-201ENST00000555160 670 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC011458.1-201ENST00000604034 617 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 MIR486-1-201ENST00000612171 68 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 PART1_2.1-201ENST00000612397 250 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AL157770.1-201ENST00000623049 439 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC104985.3-201ENST00000623479 597 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 AC091905.1-201ENST00000624400 311 ntBASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4BQ9Y4P1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC010733.2-201ENST00000589496 5702 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC007685.1-201ENST00000329806 452 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-837P-201ENST00000391056 108 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 HMGN2P8-201ENST00000391458 268 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 RPL31P1-201ENST00000398116 372 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 OSTCP5-201ENST00000425293 453 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 GTF2IP3-201ENST00000433887 494 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 BMS1P19-201ENST00000433925 393 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 MTCO1P53-201ENST00000441633 699 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC104073.1-201ENST00000451988 151 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 UBDP1-202ENST00000457888 382 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 SYPL1P1-201ENST00000473622 768 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 RPL31P13-201ENST00000484151 370 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC093853.1-201ENST00000515689 483 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP309-201ENST00000516670 106 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 DEFB130C-202ENST00000530001 230 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AL592148.2-201ENST00000612210 372 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC087821.2-201ENST00000637086 450 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC130650.2-201ENST00000618736 2403 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
ATG4BQ9Y4P1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC024560.2-201ENST00000507981 1497 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms