Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TRAPPC4Q9Y296 SNORA51.12-201ENST00000384448 134 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC105402.2-201ENST00000438503 358 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC092641.1-201ENST00000440229 772 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 RPS26P30-201ENST00000443431 335 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 HMGB1P48-201ENST00000446155 598 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 MTND1P33-201ENST00000446251 917 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 GXYLT1P1-201ENST00000446657 490 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC007967.1-201ENST00000455422 1159 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC008280.2-201ENST00000455473 307 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 U3.44-201ENST00000458938 192 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC091564.1-201ENST00000464563 479 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AP000563.1-201ENST00000490865 758 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC016550.1-201ENST00000505348 785 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 RN7SKP13-201ENST00000515933 244 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 GTF2IP22-201ENST00000554443 182 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC016542.1-201ENST00000608259 493 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC018926.1-201ENST00000616335 435 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC121761.2-201ENST00000617300 689 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC080188.3-201ENST00000624842 748 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 AC073055.1-201ENST00000456901 1621 ntBASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAPPC4Q9Y296 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC010733.2-201ENST00000589496 5702 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 FRG1CP-201ENST00000358464 769 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 RNA5SP391-201ENST00000363456 119 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 SNORA62.3-201ENST00000365110 153 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 NDUFB4P5-201ENST00000415445 361 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC241520.1-201ENST00000422654 1099 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL513174.1-201ENST00000423182 629 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 UBE2V1P5-201ENST00000440070 405 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL929288.2-201ENST00000446368 407 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 RPL21P23-201ENST00000446654 460 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 BX248409.1-201ENST00000455497 255 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 RPL37P6-202ENST00000464216 403 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC015724.1-201ENST00000478577 156 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 RN7SL283P-201ENST00000489055 303 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC108078.3-201ENST00000502633 489 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC110792.2-201ENST00000510278 224 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 SNORA70.19-201ENST00000516717 90 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 MTND5P21-201ENST00000531961 522 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL442163.2-201ENST00000553912 710 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 ZNF192P1-203ENST00000565888 810 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC133794.1-201ENST00000602731 914 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC006557.5-201ENST00000603126 811 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 MIR6864-201ENST00000617935 70 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AL161637.1-201ENST00000622380 412 ntBASIC3.14□□□□□ -1.91
TRAPPC4Q9Y296 AC243312.2-201ENST00000623340 601 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms