Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF6Q9Y252 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL355578.1-201ENST00000607405 1328 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL359893.1-201ENST00000447628 1580 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 RNU6-263P-201ENST00000363811 107 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 RNVU1-3-201ENST00000364313 161 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 RNU6-921P-201ENST00000384361 107 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 MIR649-201ENST00000384843 97 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 RPL7P27-201ENST00000403775 720 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 ZNF602P-201ENST00000405929 924 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL024507.1-201ENST00000412741 274 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 RPL31P2-201ENST00000413849 377 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC017083.1-201ENST00000428093 483 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL645931.1-201ENST00000439737 410 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 PDSS1P2-201ENST00000449397 678 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 TVP23BP2-201ENST00000455082 615 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 RPL21P11-201ENST00000461458 483 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL139174.1-201ENST00000531489 886 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC044913.1-201ENST00000557200 430 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC107954.1-201ENST00000565906 727 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC090079.2-201ENST00000575289 768 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 KLKP1-201ENST00000595979 403 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 GAS5-AS1-201ENST00000602767 694 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC012468.1-201ENST00000604888 430 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL512427.1-201ENST00000618593 349 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC068722.2-201ENST00000618734 544 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC080188.3-201ENST00000624842 748 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC111188.2-201ENST00000529697 1387 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 AC066616.2-201ENST00000559334 1481 ntBASIC3.47□□□□□ -1.85
RNF6Q9Y252 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF6Q9Y252 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF6Q9Y252 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
RNF6Q9Y252 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
RNF6Q9Y252 RNU6-115P-201ENST00000364310 107 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 Y_RNA.493-201ENST00000384422 102 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 RPL17P50-201ENST00000396131 546 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 RNU4-78P-201ENST00000410940 126 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 RNU6-575P-201ENST00000411326 105 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC009237.5-201ENST00000414271 501 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 BTF3P8-201ENST00000414577 526 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 HIGD1AP12-201ENST00000427832 281 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AL138799.3-201ENST00000438968 350 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 HMGN1P11-201ENST00000508668 303 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 PCBP2P3-201ENST00000509726 843 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 RAC1P2-201ENST00000511164 579 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 RNU6-885P-201ENST00000516607 104 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 RNA5SP309-201ENST00000516670 106 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 snoZ278.1-201ENST00000517059 112 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 OR4A45P-201ENST00000529954 901 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 LSM6P2-201ENST00000552208 177 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC126365.2-201ENST00000580630 379 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 SNORD39.3-201ENST00000584451 71 ntBASIC3.46□□□□□ -1.86
RNF6Q9Y252 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF6Q9Y252 AC010928.3-201ENST00000587712 541 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms