Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 AC093831.2-201ENST00000624393 3427 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 HSPD1P16-201ENST00000402302 394 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 VDAC1P3-201ENST00000434069 851 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AC112220.1-201ENST00000434628 355 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 RPL7P12-201ENST00000446719 750 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AC010468.1-201ENST00000461022 817 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AC133134.1-201ENST00000466800 359 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AP003122.3-201ENST00000526316 255 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 RFPL1S-203ENST00000539579 330 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 AC009039.2-201ENST00000624524 529 ntBASIC4.09□□□□□ -1.75
SHANK2Q9UPX8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHANK2Q9UPX8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHANK2Q9UPX8 MAPK10-362ENST00000641864 4484 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 RPS29P6-201ENST00000438196 145 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AC078817.1-201ENST00000492623 435 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 NIPA2P2-201ENST00000496376 1083 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 TXNP6-201ENST00000510190 310 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AC068657.1-201ENST00000520807 306 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AC090115.4-201ENST00000609970 188 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 DDX18P3-201ENST00000404856 2007 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 AC092593.1-201ENST00000515413 1815 ntBASIC4.08□□□□□ -1.76
SHANK2Q9UPX8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 RPL21P3-201ENST00000395517 478 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 MIR1289-2-201ENST00000408360 111 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AL451074.5-201ENST00000415894 435 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AC009963.1-201ENST00000417265 157 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 RPL21P41-201ENST00000459863 264 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AC146507.2-201ENST00000460608 476 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 RNA5SP148-201ENST00000516527 94 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 AC093311.1-201ENST00000506586 2021 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 OR11H5P-202ENST00000641612 1325 ntBASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHANK2Q9UPX8 MIR592-201ENST00000384959 97 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC245517.2-201ENST00000442890 346 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC243972.3-201ENST00000539655 198 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC027176.1-201ENST00000560204 514 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 BMS1P7-201ENST00000602440 1052 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 AC008264.2-201ENST00000610193 3731 ntBASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.06□□□□□ -1.76
SHANK2Q9UPX8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AP004217.1-201ENST00000480579 346 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC008565.1-201ENST00000509046 885 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 RNU6-548P-201ENST00000517083 115 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC004972.1-201ENST00000623934 2209 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 RPS4XP7-201ENST00000406274 780 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AL049610.1-201ENST00000423374 372 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AL590639.1-201ENST00000456484 337 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 AC008725.1-201ENST00000605123 2263 ntBASIC4.05□□□□□ -1.76
SHANK2Q9UPX8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.04□□□□□ -1.76
SHANK2Q9UPX8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms