Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNVU1-14-201ENST00000384770 164 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 MIR16-1-201ENST00000385271 89 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 OR51A3P-201ENST00000413596 924 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 BX842559.1-201ENST00000419615 532 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 Z77249.1-201ENST00000444622 1175 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 RPL29P29-201ENST00000448725 423 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 RPS15AP1-201ENST00000457423 391 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 NAP1L1P3-201ENST00000462291 880 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC010307.1-201ENST00000467206 836 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 PRDX3P4-201ENST00000470828 747 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 SETP14-201ENST00000497538 873 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC119751.1-201ENST00000513357 765 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 MTCYBP28-201ENST00000566728 1132 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 MTCO1P40-201ENST00000574371 625 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 MIR5186-201ENST00000577504 120 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC022069.1-201ENST00000582910 658 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC016542.1-201ENST00000608259 493 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL159169.3-201ENST00000608871 561 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AC096577.2-201ENST00000611455 153 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL713922.2-201ENST00000619384 716 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 AL136520.1-201ENST00000600311 1322 ntBASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCF1Q9UBD9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RNU1-18P-201ENST00000363062 164 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RNU5B-1-201ENST00000363286 116 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RNU6-353P-201ENST00000364266 108 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RNU6-444P-201ENST00000383988 108 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 SNORA11.1-201ENST00000408133 129 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC017079.2-201ENST00000416102 485 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 TAF13P2-201ENST00000416876 286 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC008280.1-201ENST00000418851 412 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC013262.1-201ENST00000426710 252 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 OR51AB1P-201ENST00000429046 620 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RPL36P19-201ENST00000430744 301 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC010881.1-201ENST00000433830 235 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RPS7P2-201ENST00000435134 607 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC234064.1-201ENST00000436312 247 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC005019.1-201ENST00000436455 431 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 USP9YP7-201ENST00000436723 430 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RPL26P28-201ENST00000451325 435 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 USP9YP32-201ENST00000452432 430 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC021146.1-201ENST00000511202 716 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 PTGES3P3-201ENST00000511479 482 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC068339.2-201ENST00000534395 618 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC022079.2-201ENST00000619739 566 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 BX649567.1-201ENST00000642071 1134 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCF1Q9UBD9 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms