Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 RNU6-335P-201ENST00000364563 113 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC068538.1-201ENST00000376856 336 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 SNORA70F-201ENST00000384142 135 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 SNORD116-1-201ENST00000384335 95 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 MTCO1P17-201ENST00000411522 491 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 RPL7P8-201ENST00000411964 730 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 PGBD4P8-201ENST00000412993 562 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC140479.3-201ENST00000418944 1126 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC104333.2-201ENST00000422630 192 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC092832.1-201ENST00000422934 400 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 CENPIP1-201ENST00000425713 902 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC244035.1-201ENST00000430042 390 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 CDC27P1-201ENST00000445384 715 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 KATNBL1P6-201ENST00000453433 915 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC079168.2-201ENST00000453977 416 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AL356981.1-201ENST00000454879 684 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 HMGB3P30-201ENST00000457863 606 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC092754.2-201ENST00000463506 460 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC103987.1-201ENST00000473394 348 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 ST13P14-201ENST00000474095 734 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 MTCO3P28-201ENST00000513351 515 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 RNU6-714P-201ENST00000516963 103 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC009643.1-201ENST00000532030 391 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC013828.2-201ENST00000532487 235 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AL121766.1-201ENST00000547436 487 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 GTF2IP22-201ENST00000554443 182 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC093249.4-201ENST00000564755 259 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 ROCK1P1-201ENST00000573767 549 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AL020997.2-201ENST00000602607 184 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AP000403.1-201ENST00000603349 851 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC128687.1-201ENST00000605304 619 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC018755.4-201ENST00000619715 454 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC073530.2-201ENST00000623987 261 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.34□□□□□ -1.71
LRFN1Q9P244 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 ELL2P3-201ENST00000457883 1602 ntBASIC4.34□□□□□ -1.71
LRFN1Q9P244 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRFN1Q9P244 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRFN1Q9P244 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
LRFN1Q9P244 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 AL133412.1-201ENST00000380194 2992 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 AC010733.2-201ENST00000589496 5702 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRFN1Q9P244 Y_RNA.97-201ENST00000363094 102 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 SNORD113.2-201ENST00000364166 89 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 SNORA71.2-201ENST00000364941 134 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 RNU6-769P-201ENST00000384407 104 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 MT-TH-201ENST00000387441 69 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 AL049693.1-201ENST00000402760 611 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 RNU6-712P-201ENST00000410558 100 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 RN7SKP177-201ENST00000410567 355 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 EI24P1-201ENST00000416584 867 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 NPM1P11-201ENST00000417106 855 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 RPS27AP14-201ENST00000422868 454 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 AL445669.1-201ENST00000426743 755 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 AL365184.2-201ENST00000431139 435 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 MTND4LP10-201ENST00000435146 291 ntBASIC4.33□□□□□ -1.72
LRFN1Q9P244 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.33□□□□□ -1.72
LRFN1Q9P244 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms