Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC055855.1-201ENST00000489563 579 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RN7SKP82-201ENST00000516786 223 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 SNORA81.3-201ENST00000517283 198 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 CYCSP25-201ENST00000525280 316 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC009120.3-201ENST00000563335 499 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC091193.1-201ENST00000604640 448 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC008555.7-201ENST00000605008 583 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC009229.3-201ENST00000608056 282 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AC109309.2-201ENST00000612597 332 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AL355365.1-201ENST00000616480 294 ntBASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CUEDC1Q9NWM3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 Y_RNA.39-201ENST00000362620 98 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-774P-201ENST00000363238 107 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP478-201ENST00000364657 115 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 MT-TW-201ENST00000387382 68 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL356421.1-201ENST00000403255 413 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-1050P-201ENST00000410388 107 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RPL30P3-201ENST00000424262 333 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC108479.1-201ENST00000431142 427 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL391987.1-201ENST00000441025 200 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC114495.1-201ENST00000441274 436 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC079922.1-201ENST00000443291 359 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RPL5P7-201ENST00000444235 813 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 PTMAP3-201ENST00000447474 330 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 MTND4LP30-201ENST00000454092 297 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 TRBV26-201ENST00000456572 344 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 HMGB3P30-201ENST00000457863 606 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RPL7P5-201ENST00000471472 736 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RN7SL643P-201ENST00000471845 291 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 IGHV4-55-201ENST00000520889 368 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC078899.1-201ENST00000521432 1185 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 IGHV1-14-201ENST00000523391 241 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC022080.3-201ENST00000544433 482 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC135001.1-201ENST00000544546 283 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC092747.3-201ENST00000603769 301 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL512329.2-201ENST00000607350 548 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AC103858.2-201ENST00000621471 543 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 AL606534.2-204ENST00000635008 178 ntBASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.09□□□□□ -1.43
CUEDC1Q9NWM3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.09□□□□□ -1.44
CUEDC1Q9NWM3 AL442639.1-201ENST00000625030 1899 ntBASIC6.09□□□□□ -1.44
CUEDC1Q9NWM3 AC104966.1-201ENST00000467010 1464 ntBASIC6.09□□□□□ -1.44
CUEDC1Q9NWM3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CUEDC1Q9NWM3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 AC016583.1-201ENST00000624221 2431 ntBASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.08□□□□□ -1.44
CUEDC1Q9NWM3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms