Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 RN7SKP114-201ENST00000410327 279 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 DDX39BP1-205ENST00000422507 192 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 EZH2P1-201ENST00000431167 291 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC104850.1-201ENST00000435940 476 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC073850.1-201ENST00000449243 255 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC079382.1-201ENST00000493346 557 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 PGBD4P4-201ENST00000509673 613 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC105914.1-201ENST00000511798 226 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 RN7SKP260-201ENST00000516907 149 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 RN7SKP234-201ENST00000517173 224 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AP003034.1-201ENST00000534621 422 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL512310.1-201ENST00000548639 172 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC068446.3-201ENST00000555285 382 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC044860.2-201ENST00000561005 179 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC107954.1-201ENST00000565906 727 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 MIR7155-201ENST00000615925 56 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 MUC2-202ENST00000613187 4845 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AL450345.1-202ENST00000605741 3881 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC009902.3-201ENST00000606235 2172 ntBASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM39Q9HCM9 AC011755.1-201ENST00000623763 2049 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC093535.2-201ENST00000624769 2326 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RNU6-1085P-201ENST00000363576 107 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RNU6-339P-201ENST00000384310 107 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC093162.1-201ENST00000419682 124 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MTCYBP24-201ENST00000420387 1106 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RPL7P57-201ENST00000423238 740 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC137499.1-201ENST00000427602 88 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 ELOCP14-201ENST00000428070 331 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 PTMAP6-201ENST00000439110 327 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 ELOCP7-201ENST00000439968 331 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL512326.1-201ENST00000443050 721 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC132479.1-201ENST00000449160 144 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MTND2P24-201ENST00000453434 806 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MTND1P9-201ENST00000453775 944 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RN7SL443P-201ENST00000464331 290 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MTCO2P29-201ENST00000465212 189 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 ST13P14-201ENST00000474095 734 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RPL7AP6-201ENST00000477943 801 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC004453.1-201ENST00000487895 408 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RN7SL591P-201ENST00000496150 292 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC010587.1-201ENST00000505809 469 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MTCO3P44-201ENST00000510977 541 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL157687.1-201ENST00000554853 619 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC087763.1-201ENST00000603391 286 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL139286.1-201ENST00000604465 483 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC008277.2-201ENST00000605196 797 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL365503.1-201ENST00000605247 905 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AL445222.1-201ENST00000607259 628 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 AC091905.1-201ENST00000624400 311 ntBASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM39Q9HCM9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms