Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU1-63P-201ENST00000383902 164 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 PTMAP2-201ENST00000397627 327 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RNA5SP44-201ENST00000410446 133 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RN7SKP177-201ENST00000410567 355 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 CYCSP19-201ENST00000411715 316 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RPS23P10-201ENST00000416185 486 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC108032.1-201ENST00000416706 207 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 CYP4F29P-201ENST00000420685 446 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC005005.2-201ENST00000420779 380 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RPL23AP74-201ENST00000437246 471 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC114495.1-201ENST00000441274 436 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL358232.1-201ENST00000448030 501 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RPL39P6-201ENST00000448289 150 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 MTCO2P6-201ENST00000463134 685 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 NCOR1P1-202ENST00000486162 291 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RN7SL691P-201ENST00000494487 301 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 PTGES3P3-201ENST00000511479 482 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RNA5SP143-201ENST00000516936 115 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RNU4-60P-201ENST00000517239 135 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 OR5AK1P-201ENST00000524837 922 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC105233.3-201ENST00000531125 744 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC009094.1-201ENST00000564443 426 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC002400.1-201ENST00000569310 726 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 MIR4637-201ENST00000582405 84 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC053481.4-201ENST00000583164 216 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RPL23AP92-201ENST00000603609 255 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL158042.1-201ENST00000605338 460 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 RNU4-89P-201ENST00000607443 133 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC243773.3-201ENST00000613270 256 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 MIR6875-201ENST00000617506 72 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC009318.4-201ENST00000620496 486 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC103858.2-201ENST00000621471 543 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AC139769.1-204ENST00000472297 1931 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 AL079343.1-201ENST00000572358 1771 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 NXPH1-205ENST00000602349 1953 ntBASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR1BQ9H9Y6 MTND4P34-201ENST00000572715 1371 ntBASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 AC090337.1-201ENST00000579651 2074 ntBASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 AC104454.1-201ENST00000421341 1401 ntBASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
POLR1BQ9H9Y6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 RNU6-730P-201ENST00000383954 104 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 RNU5A-2P-201ENST00000384337 116 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 RNU6-757P-201ENST00000410334 100 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 RNA5SP306-201ENST00000411087 107 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC107081.1-201ENST00000414975 361 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 RSL24D1P3-201ENST00000449255 495 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 MTCO3P11-201ENST00000455103 774 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC133473.1-201ENST00000455173 299 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 PABPC1P3-201ENST00000469174 459 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 OR4G11P-201ENST00000492842 939 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 OR5H5P-201ENST00000503164 928 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC005798.1-201ENST00000513715 387 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AP003461.1-201ENST00000528866 78 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 OR6C73P-201ENST00000546432 358 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AL512347.1-201ENST00000566420 503 ntBASIC4.15□□□□□ -1.75
POLR1BQ9H9Y6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms