Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GAPDHP17-201ENST00000449858 1001 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 PSPHP1-201ENST00000450062 261 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 MTCO1P42-201ENST00000457379 726 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RPS3AP41-201ENST00000462701 778 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RN7SL385P-201ENST00000468873 276 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RN7SL244P-201ENST00000493405 297 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RPL30P11-201ENST00000495304 339 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-430P-201ENST00000517078 107 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC134698.5-201ENST00000519444 336 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 TOMM20P2-201ENST00000540082 421 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 TVP23CP2-201ENST00000571473 623 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 TPMTP1-201ENST00000592307 737 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 COX6CP4-201ENST00000605798 228 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AL357078.3-201ENST00000607528 618 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC080013.4-201ENST00000607624 649 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC093799.2-201ENST00000610062 578 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC007014.2-201ENST00000615581 479 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AL118496.1-201ENST00000440201 1812 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 AC017104.4-201ENST00000636283 1592 ntBASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.48□□□□□ -1.69
AMBRA1Q9C0C7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC005332.5-201ENST00000591222 2919 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 EOGT-210ENST00000615922 1931 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RNA5SP391-201ENST00000363456 119 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC016769.3-201ENST00000396562 315 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-603P-201ENST00000411403 107 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 C1DP2-201ENST00000418167 426 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC099336.2-201ENST00000422457 254 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC234779.1-201ENST00000425910 285 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC104837.2-201ENST00000427236 424 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC091390.1-201ENST00000433904 331 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RHOT1P3-201ENST00000436571 331 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC122718.1-201ENST00000439448 744 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 MTND6P13-201ENST00000443510 523 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 Z82190.1-201ENST00000454534 490 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 TRBV26-201ENST00000456572 344 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC099560.2-201ENST00000457554 255 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 FAM133DP-201ENST00000464802 691 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC005726.1-201ENST00000494679 427 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RN7SL558P-201ENST00000497468 299 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RN7SKP147-201ENST00000517154 244 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 OR5AP1P-201ENST00000529730 940 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AC063949.1-201ENST00000552900 865 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 RPL21P5-201ENST00000554662 472 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 AL049839.1-201ENST00000556151 657 ntBASIC4.47□□□□□ -1.69
AMBRA1Q9C0C7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms