Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UPF3BQ9BZI7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 ZNF33CP-201ENST00000432492 2030 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 SNORA5B-201ENST00000363786 132 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 SNORA46-201ENST00000384762 135 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 NEK4P1-201ENST00000433383 879 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 UBE2V2P1-201ENST00000434717 398 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AL138799.3-201ENST00000438968 350 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 RN7SL75P-201ENST00000461926 281 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 RN7SL504P-201ENST00000494496 287 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 KATNBL1P4-201ENST00000503545 918 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC110794.1-201ENST00000505816 425 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC108120.2-201ENST00000512973 294 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC034244.2-201ENST00000514668 858 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AL157394.1-201ENST00000562983 1224 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 AC087565.3-202ENST00000642085 1603 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 GABPAP-201ENST00000419271 1356 ntBASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
UPF3BQ9BZI7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 FTLP6-201ENST00000355274 422 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 RNA5SP432-201ENST00000362480 116 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 RNU6-618P-201ENST00000363518 112 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC245054.2-201ENST00000415639 319 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AL353705.1-201ENST00000433468 480 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC233982.1-201ENST00000451247 436 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 PRDX3P4-201ENST00000470828 747 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 KC877373.1-201ENST00000479066 408 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 MTCO1P30-201ENST00000515244 580 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 RNA5SP341-201ENST00000516261 117 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 SEC11B-201ENST00000518383 499 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 IGHV3-76-201ENST00000522465 295 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 ZNF192P1-203ENST00000565888 810 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 RPL12P50-201ENST00000603116 116 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC006023.1-201ENST00000603944 259 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC136601.2-201ENST00000604356 474 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC005021.1-201ENST00000608730 355 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 MIR7973-1-201ENST00000614683 76 ntBASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.71□□□□□ -1.82
UPF3BQ9BZI7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 RNA5SP126-201ENST00000365092 109 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 RPL21P3-201ENST00000395517 478 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC110754.1-201ENST00000399740 601 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 ELOCP23-201ENST00000452014 332 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC146507.2-201ENST00000460608 476 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 RPS3AP43-201ENST00000479743 781 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC011472.4-201ENST00000615848 491 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AL356490.1-201ENST00000623079 479 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC093831.2-201ENST00000624393 3427 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AL353743.4-201ENST00000422653 1547 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 AC021755.1-201ENST00000559747 1447 ntBASIC3.7□□□□□ -1.82
UPF3BQ9BZI7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.69□□□□□ -1.82
UPF3BQ9BZI7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms