Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 PCMTD1P7-201ENST00000634506 357 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 RNA5SP88-201ENST00000365560 109 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC019178.2-201ENST00000423595 505 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 MED14P1-201ENST00000430517 648 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC087312.1-201ENST00000471411 480 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC090013.1-201ENST00000485147 480 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC008802.1-201ENST00000519121 791 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC090819.1-201ENST00000523800 1111 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 MIR5685-201ENST00000579080 79 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC010620.1-201ENST00000601088 1102 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC008739.3-201ENST00000603262 127 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AP003117.2-201ENST00000606010 545 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC131238.1-201ENST00000617135 328 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 AC018816.2-201ENST00000621460 353 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 CR392039.5-201ENST00000623201 510 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 SMG1P4-204ENST00000523028 4131 ntBASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTFDC1Q9BY42 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 AC090229.1-201ENST00000590983 1609 ntBASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 MTCO1P23-201ENST00000415223 1526 ntBASIC5.15□□□□□ -1.58
RTFDC1Q9BY42 RPL23AP57-201ENST00000332361 466 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 Y_RNA.302-201ENST00000364997 102 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RNU6-878P-201ENST00000384578 110 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 Z99497.1-201ENST00000421282 135 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RPL23AP25-201ENST00000430973 463 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 UBE2D3P4-201ENST00000441973 436 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RPL29P29-201ENST00000448725 423 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AL445433.1-201ENST00000457507 257 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RPL31P3-201ENST00000458430 332 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC092754.2-201ENST00000463506 460 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC146507.1-201ENST00000468335 354 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RPL21P103-201ENST00000479921 488 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC090453.1-201ENST00000495560 436 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC108941.1-201ENST00000502853 530 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC117522.2-201ENST00000510049 657 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RNU6-759P-201ENST00000516740 103 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC006064.5-201ENST00000541782 248 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AL133457.1-201ENST00000564251 987 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 OR4G1P-201ENST00000588632 938 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC233280.2-201ENST00000603917 1070 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC024560.3-201ENST00000608482 349 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 AC073530.2-201ENST00000623987 261 ntBASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms