Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AL109766.1-201ENST00000555080 552 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AC051619.2-201ENST00000559063 397 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AC034105.3-201ENST00000565294 442 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AC012616.1-201ENST00000600294 197 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AL133481.2-203ENST00000607558 139 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 MIR6719-201ENST00000622428 87 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AC009033.1-201ENST00000624279 431 ntBASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 FER-210ENST00000628534 558 ntTSL 5 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TRAIPQ9BWF2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RNA5SP453-201ENST00000362503 119 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RNU6-511P-201ENST00000363496 107 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RNU6-1279P-201ENST00000383917 103 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 THAP12P5-201ENST00000405864 2275 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RPL7AP73-201ENST00000413490 353 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 SSXP9-201ENST00000417503 292 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RNF10P1-201ENST00000418589 369 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 CRIP1P1-201ENST00000427567 185 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 ATP5JP1-201ENST00000431631 322 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 HMGB1P31-201ENST00000437242 427 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 MTCO3P45-201ENST00000443036 613 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 OR2AO1P-201ENST00000476497 403 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 NIP7P2-201ENST00000485801 544 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 CKAP2P1-201ENST00000555477 2049 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 MIR1269B-201ENST00000580405 75 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AL022099.1-201ENST00000604551 712 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AC025574.2-201ENST00000615621 514 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 AL034549.2-201ENST00000618285 3373 ntBASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRAIPQ9BWF2 IRF5P1-201ENST00000504852 2164 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 PABPC1P6-201ENST00000445594 1829 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL137141.1-201ENST00000624622 4836 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RNU4-48P-201ENST00000365559 182 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RNU6-606P-201ENST00000384721 111 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RNU6-882P-201ENST00000391025 103 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RNU6-876P-201ENST00000391295 104 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 TXNP7-201ENST00000406296 293 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC016769.2-201ENST00000414815 475 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC119751.6-201ENST00000416712 186 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 OR6D1P-201ENST00000436165 939 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 FDX1P2-201ENST00000450769 375 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 RNU6-420P-201ENST00000458780 107 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 DUTP1-201ENST00000493631 470 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC026427.2-201ENST00000506228 536 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC097486.1-201ENST00000515331 210 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 IGLV3-24-201ENST00000517477 197 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.6-201ENST00000603753 252 ntBASIC6.11□□□□□ -1.43
TRAIPQ9BWF2 AL670379.11-201ENST00000604059 253 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms