Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC006960.3-201ENST00000561845 705 ntBASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AL160237.3-201ENST00000604114 1013 ntBASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC034229.5-201ENST00000624258 185 ntBASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCM2Q9BSQ5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 GABPAP-201ENST00000419271 1356 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ELL2P4-201ENST00000446870 1376 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ZNF29P-201ENST00000225587 168 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RNU4-51P-201ENST00000364206 140 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RNA5SP424-201ENST00000390988 115 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 CYCSP19-201ENST00000411715 316 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RHEBP3-201ENST00000411920 351 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AL136133.1-201ENST00000413694 376 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RPF2P1-201ENST00000424137 906 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 DPRXP1-201ENST00000426312 460 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC114973.1-201ENST00000429057 632 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 MOB1AP1-201ENST00000430903 535 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 SEPT7P5-201ENST00000434048 306 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 RPL7P15-201ENST00000461190 712 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 UBE2CP3-201ENST00000502715 450 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC005798.1-201ENST00000513715 387 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 MTCO1P49-201ENST00000523429 802 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AP001317.1-201ENST00000531194 960 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AL049838.1-201ENST00000563647 981 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC093519.1-201ENST00000566109 298 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC027449.1-201ENST00000608890 407 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AL157770.1-201ENST00000623049 439 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC098679.5-201ENST00000624394 571 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 OR1S1-201ENST00000624470 978 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ZNF33CP-201ENST00000432492 2030 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 AP001148.1-201ENST00000624124 2359 ntBASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCM2Q9BSQ5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 Z99496.1-201ENST00000469424 1477 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MTND5P31-201ENST00000419366 1374 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 RNU6-1066P-201ENST00000363573 105 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 Y_RNA.472-201ENST00000384322 102 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MIR217-201ENST00000384817 110 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MIR554-201ENST00000384874 96 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL121978.1-201ENST00000402778 359 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 Z93242.1-201ENST00000427102 353 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC096632.1-201ENST00000427395 310 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC112492.1-201ENST00000449607 712 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL009048.1-201ENST00000450437 298 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC079776.3-201ENST00000450665 370 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 NANOGP10-201ENST00000453325 895 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 VPS26AP1-201ENST00000483197 979 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC005726.1-201ENST00000494679 427 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC016065.2-201ENST00000514530 444 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms