Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUP88Q99567 HIGD1AP10-201ENST00000527837 282 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AC092851.1-201ENST00000535964 478 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NUP88Q99567 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP88Q99567 AC067852.4-201ENST00000590314 478 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AL031775.1-201ENST00000607014 887 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AC011939.3-201ENST00000613686 466 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AC018816.2-201ENST00000621460 353 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUP88Q99567 CYP3A51P-201ENST00000633513 256 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 MIR4496-201ENST00000635896 61 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP88Q99567 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP88Q99567 AC091046.3-201ENST00000631455 1574 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AL031985.3-201ENST00000565390 2449 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 AC021242.1-201ENST00000507315 2035 ntBASIC5.06□□□□□ -1.6
NUP88Q99567 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUP88Q99567 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP88Q99567 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUP88Q99567 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC093535.2-201ENST00000624769 2326 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP88Q99567 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
NUP88Q99567 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 Y_RNA.51-201ENST00000362725 102 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 SNORD82-201ENST00000365530 70 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 RPS26P8-201ENST00000393490 348 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 VN1R8P-201ENST00000407739 893 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 PDSS1P1-201ENST00000422953 1114 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 KCTD10P1-201ENST00000434203 625 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP88Q99567 AL360221.1-201ENST00000445989 335 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 RNU7-136P-201ENST00000458819 69 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 RPL37P6-202ENST00000464216 403 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 RPL30P9-201ENST00000465586 330 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC087312.1-201ENST00000471411 480 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC012158.1-204ENST00000483430 465 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 RPL35P6-201ENST00000490024 372 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AL024509.2-201ENST00000493462 493 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC006499.5-201ENST00000505037 514 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC087276.1-201ENST00000529659 480 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 PCMTD1P2-201ENST00000565017 355 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP88Q99567 BNIP3P23-201ENST00000599655 511 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 BBIP1P1-201ENST00000602999 279 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AL353600.1-201ENST00000608148 251 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC103710.4-201ENST00000609301 899 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 AC007546.1-201ENST00000619452 559 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 RNA5SP196-201ENST00000625967 102 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP88Q99567 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP88Q99567 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP88Q99567 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
NUP88Q99567 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
NUP88Q99567 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP88Q99567 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP88Q99567 MTCO1P23-201ENST00000415223 1526 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP88Q99567 Y_RNA.201-201ENST00000364052 96 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP88Q99567 RNU1-13P-201ENST00000384499 162 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP88Q99567 DHFRP6-201ENST00000401776 268 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 RNA5SP146-201ENST00000410743 123 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 RN7SKP167-201ENST00000411047 285 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 CYCSP10-201ENST00000417973 294 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 RPL17P36-201ENST00000420302 549 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP88Q99567 AC114755.5-201ENST00000447760 831 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 ARPC3P5-201ENST00000448802 534 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP88Q99567 STMN1P2-201ENST00000508435 439 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP88Q99567 AC022861.1-201ENST00000522981 663 ntBASIC5.04□□□□□ -1.6
NUP88Q99567 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP88Q99567 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP88Q99567 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP88Q99567 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP88Q99567 AC141257.3-201ENST00000572906 215 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms