Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC026979.1-201ENST00000492525 396 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 BTF3P12-201ENST00000519620 469 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC022616.6-201ENST00000520479 119 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC008562.1-201ENST00000521763 330 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AP005597.4-201ENST00000526762 229 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC090312.1-201ENST00000580637 348 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC108738.1-201ENST00000603703 237 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC008814.1-201ENST00000603797 406 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC021106.3-201ENST00000623925 531 ntBASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNGAP1Q96PV0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
SYNGAP1Q96PV0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 OR5J1P-201ENST00000313544 939 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 RNA5SP455-201ENST00000365190 119 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 RN7SKP186-201ENST00000365371 303 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 Y_RNA.384-201ENST00000383909 102 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 RN7SKP32-201ENST00000410167 303 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC233981.1-201ENST00000423224 461 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 OR2B7P-201ENST00000429302 934 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 RPS3AP54-201ENST00000435535 734 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 BBIP1P1-201ENST00000602999 279 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC011468.4-201ENST00000603942 409 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC008966.2-201ENST00000606157 453 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AC092162.3-201ENST00000624511 1624 ntBASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SYNGAP1Q96PV0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RLIMP2-201ENST00000427891 1563 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RNU1-39P-201ENST00000383897 165 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RPL23AP32-201ENST00000395315 459 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 CHEK2P3-201ENST00000416118 248 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC019097.1-201ENST00000424783 735 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AL451062.2-201ENST00000427515 271 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RPS24P8-201ENST00000431490 402 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 GPM6BP2-201ENST00000432046 144 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC024082.2-201ENST00000434771 238 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RHOT1P3-201ENST00000436571 331 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 GPM6BP1-201ENST00000446387 144 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AL136380.1-201ENST00000447970 162 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RPL37P3-201ENST00000456825 293 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 RPS15AP1-201ENST00000457423 391 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SNORA19.2-201ENST00000516013 114 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 MIR5096-201ENST00000583713 70 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC115621.1-201ENST00000604653 858 ntBASIC5.89□□□□□ -1.47
SYNGAP1Q96PV0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms