Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP258-201ENST00000362750 119 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 ANAPC10P1-201ENST00000395991 556 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP317-201ENST00000410176 116 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP311-201ENST00000411290 116 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC027644.1-201ENST00000419595 298 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 Z97055.1-201ENST00000419730 712 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 FNDC3CP-201ENST00000420795 1155 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 NANOGP5-201ENST00000424456 877 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 OSTCP5-201ENST00000425293 453 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC127537.2-201ENST00000439258 465 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC084198.1-201ENST00000477747 402 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC020699.1-201ENST00000505161 445 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC113420.1-201ENST00000507903 571 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP315-201ENST00000516340 116 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP312-201ENST00000517068 116 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 MTCO3P15-201ENST00000526563 574 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 LRRC6P1-201ENST00000532188 885 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC087897.1-201ENST00000550134 156 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AL035411.2-201ENST00000604022 421 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC106052.1-201ENST00000608029 497 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC009974.1-201ENST00000608881 455 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC092954.1-201ENST00000609121 445 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC006329.2-201ENST00000611491 394 ntBASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM5Q96HC4 LINC00561-201ENST00000565815 2738 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RNU6-50P-201ENST00000362356 103 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RNA5SP443-201ENST00000363083 132 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 MIR217-201ENST00000384817 110 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RPL21P65-201ENST00000406094 466 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AMD1P2-201ENST00000412936 992 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 MTATP6P20-201ENST00000414147 562 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AL592310.1-201ENST00000414330 671 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC093698.1-201ENST00000423843 571 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC092447.3-201ENST00000426027 686 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 PTGES3P1-201ENST00000439531 483 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 H2AFZP6-201ENST00000444403 394 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC114755.5-201ENST00000447760 831 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RPS24P6-201ENST00000452670 400 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 RPL23AP62-201ENST00000463396 453 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 PLGLA-201ENST00000465668 449 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC013828.1-201ENST00000481845 158 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC108078.3-201ENST00000502633 489 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC004069.2-201ENST00000505438 1114 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC108064.1-201ENST00000513791 460 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 SNORA31.20-201ENST00000517111 133 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AP001189.2-201ENST00000527320 189 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC092747.2-201ENST00000545069 983 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC008127.2-201ENST00000549925 1075 ntBASIC3.79□□□□□ -1.8
PDLIM5Q96HC4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms