Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 CCDC58P3-201ENST00000590792 430 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC112230.1-201ENST00000604342 547 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC069304.2-201ENST00000605154 435 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC087683.2-201ENST00000611384 326 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC090246.1-201ENST00000616499 426 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 NUP58P1-201ENST00000502546 1738 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL157700.1-201ENST00000561973 1432 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 RNVU1-3-201ENST00000364313 161 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RNU6-335P-201ENST00000364563 113 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 RNU6-837P-201ENST00000391056 108 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC016769.3-201ENST00000396562 315 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AF228730.1-201ENST00000397972 663 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RPL31P1-201ENST00000398116 372 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RPS3AP23-201ENST00000401762 784 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 RPL23AP46-201ENST00000438548 490 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 MTND2P20-201ENST00000440805 661 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC098826.2-201ENST00000452011 651 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 MTCO3P16-201ENST00000454456 754 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 RPL23AP24-201ENST00000458203 385 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC109327.1-201ENST00000471666 403 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC013356.1-201ENST00000489027 564 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RN7SL810P-201ENST00000493031 276 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC004069.2-201ENST00000505438 1114 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC021146.1-201ENST00000511202 716 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AP001636.2-201ENST00000525517 696 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL133457.1-201ENST00000564251 987 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL132657.2-201ENST00000564417 358 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 RPL23AP87-202ENST00000573039 466 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 LARP7P2-201ENST00000575306 125 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC022655.2-201ENST00000577280 318 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 BNIP3P26-201ENST00000600827 554 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC006254.3-201ENST00000603353 884 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 DPRXP5-201ENST00000604662 539 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL451044.1-201ENST00000604867 238 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC124312.4-201ENST00000605533 310 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL159169.3-201ENST00000608871 561 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 AC107075.1-201ENST00000613695 314 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 CYP3A51P-201ENST00000633513 256 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 CU459211.1-201ENST00000635667 749 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFT1Q96AA3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RFT1Q96AA3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
RFT1Q96AA3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFT1Q96AA3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.55□□□□□ -1.84
RFT1Q96AA3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms